RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 MOSPD3O75425 235 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 TOP3BO95985 862 aaKnown RBP5.55□□□□□ -1.52
LSM5-209ENST00000468872 CHRM5P08912 532 aaPredicted RBP5.55□□□□□ -1.52
LSM5-209ENST00000468872 HOXB9P17482 250 aaPredicted RBP5.55□□□□□ -1.52
LSM5-209ENST00000468872 HNF1BP35680 557 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 ARHGAP25P42331 645 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 SOX2P48431 317 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 RPP30P78346 268 aaKnown RBP5.55□□□□□ -1.52
LSM5-209ENST00000468872 GOLGA8FQ08AF8 430 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 BYSLQ13895 437 aaKnown RBP5.55□□□□□ -1.52
LSM5-209ENST00000468872 ANXA2RQ3ZCQ2 193 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 WDR78Q5VTH9 848 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 NAA35Q5VZE5 725 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 DSTYKQ6XUX3 929 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 H1FNTQ75WM6 255 aaPredicted RBP5.55□□□□□ -1.52
LSM5-209ENST00000468872 GALNT7Q86SF2 657 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 TTYH1Q9H313 450 aaPredicted RBP5.55□□□□□ -1.52
LSM5-209ENST00000468872 TMEM248Q9NWD8 314 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 IRAK4Q9NWZ3 460 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 CNPY2Q9Y2B0 182 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 ERCC6L2Q5T890 1561 aa5.55□□□□□ -1.52
LSM5-209ENST00000468872 ITIH6Q6UXX5 1313 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 EMSYQ7Z589 1322 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 CYP2D7A0A087X1C5 515 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 PROB1E7EW31 1015 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 SPTLC2O15270 562 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 GUCY1B2O75343 617 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 BAIAP3O94812 1187 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 F9P00740 461 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 CYP2A6P11509 494 aaPredicted RBP5.54□□□□□ -1.52
LSM5-209ENST00000468872 ZBTB16Q05516 673 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 DAZAP2Q15038 168 aaPredicted RBP5.54□□□□□ -1.52
LSM5-209ENST00000468872 PRICKLE4Q2TBC4 344 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 AP5B1Q2VPB7 878 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 GPATCH4Q5T3I0 446 aaKnown RBP5.54□□□□□ -1.52
LSM5-209ENST00000468872 NAPEPLDQ6IQ20 393 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 SLC30A9Q6PML9 568 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 SLC22A25Q6T423 547 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 PCGF5Q86SE9 256 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 ADGRG6Q86SQ4 1221 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 OR52N4Q8NGI2 321 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 RFWD2Q8NHY2 731 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 RUFY2Q8WXA3 655 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 ADAD1Q96M93 576 aaKnown RBP5.54□□□□□ -1.52
LSM5-209ENST00000468872 FCRL5Q96RD9 977 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.54□□□□□ -1.52
LSM5-209ENST00000468872 TM2D2Q9BX73 214 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 INTS2Q9H0H0 1204 aaKnown RBP5.54□□□□□ -1.52
LSM5-209ENST00000468872 LMAN2LQ9H0V9 348 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 ARL15Q9NXU5 204 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 AASSQ9UDR5 926 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 DTX4Q9Y2E6 619 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 RIMBP3CA6NJZ7 1639 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 RIMBP3BA6NNM3 1639 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 RIMBP3Q9UFD9 1639 aa5.54□□□□□ -1.52
LSM5-209ENST00000468872 WDR17Q8IZU2 1322 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 HMGB1P1B2RPK0 211 aaPredicted RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 TMEM232C9JQI7 657 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 TNPO2O14787 897 aaKnown RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 PPEF2O14830 753 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 RTN3O95197 1032 aaPredicted RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 SGPL1O95470 568 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 BMP15O95972 392 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 ST6GAL1P15907 406 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 GSTM2P28161 218 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 TYK2P29597 1187 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 MMP13P45452 471 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 MTNR1AP48039 350 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 CAMK1Q14012 370 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 IL13RA2Q14627 380 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 NAA25Q14CX7 972 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 TSTQ16762 297 aaKnown RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 CERKLQ49MI3 558 aaPredicted RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 ARL13AQ5H913 290 aaPredicted RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 CHD1LQ86WJ1 897 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 CNGA4Q8IV77 575 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 C16orf71Q8IYS4 520 aaPredicted RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 PAQR4Q8N4S7 273 aaPredicted RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 ZNF398Q8TD17 642 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 UCMAQ8WVF2 138 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 NCSTNQ92542 709 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 SH3KBP1Q96B97 665 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 ZBTB9Q96C00 473 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 C7orf26Q96N11 449 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 CD180Q99467 661 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 EYA3Q99504 573 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 USP44Q9H0E7 712 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 SEMA4BQ9NPR2 832 aaPredicted RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 OLA1Q9NTK5 396 aaKnown RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 ZDHHC7Q9NXF8 308 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 ALKBH4Q9NXW9 302 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 UPB1Q9UBR1 384 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 SLC25A10Q9UBX3 287 aaPredicted RBP5.53□□□□□ -1.52
LSM5-209ENST00000468872 FBXO4Q9UKT5 387 aa5.53□□□□□ -1.52
LSM5-209ENST00000468872 CCNT1O60563 726 aaKnown RBP5.52□□□□□ -1.53
LSM5-209ENST00000468872 AKR1A1P14550 325 aa5.52□□□□□ -1.53
LSM5-209ENST00000468872 CD72P21854 359 aa5.52□□□□□ -1.53
LSM5-209ENST00000468872 MAN1A1P33908 653 aa5.52□□□□□ -1.53
LSM5-209ENST00000468872 CASP2P42575 452 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms