RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 HAUS4Q9H6D7 363 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 CD93Q9NPY3 652 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 TMPRSS4Q9NRS4 437 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 VPS45Q9NRW7 570 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 WSB2Q9NYS7 404 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 TAS2R14Q9NYV8 317 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 ERVW-1Q9UQF0 538 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.47□□□□□ -0.57
COL4A6-205ENST00000468338 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 TMEM229AB2RXF0 380 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 GOLGA6L19H0YKK7 550 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 DDX3XO00571 662 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 MOCS3O95396 460 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 RRM1P23921 792 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 HOXD12P35452 270 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 PTGER3P43115 390 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 TPMTP51580 245 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF143P52747 638 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 GDF10P55107 478 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 RPL7AP62424 266 aaKnown RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 ECT2LQ008S8 904 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 CREB5Q02930 508 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 ZBTB16Q05516 673 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 SULT2A1Q06520 285 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF177Q13360 481 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 ASIC2Q16515 512 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 C9orf64Q5T6V5 341 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 MANEALQ5VSG8 457 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 HGSNATQ68CP4 663 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 PLEKHA7Q6IQ23 1121 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 SETD3Q86TU7 594 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 TMEFF1Q8IYR6 380 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 ZNF366Q8N895 744 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 PRCCQ92733 491 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 NTAN1Q96AB6 310 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 IQCDQ96DY2 449 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 ERLEC1Q96DZ1 483 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 PPP1R9BQ96SB3 815 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 SELENOOQ9BVL4 669 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 RETREG1Q9H6L5 497 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 PPARGC1AQ9UBK2 798 aaKnown RBP11.46□□□□□ -0.57
COL4A6-205ENST00000468338 SLCO3A1Q9UIG8 710 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 CYP8B1Q9UNU6 501 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 SNX10Q9Y5X0 201 aa11.46□□□□□ -0.57
COL4A6-205ENST00000468338 DNAH14Q0VDD8 3507 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 TARSL2A2RTX5 802 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 C10orf142B7Z368 130 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 RNF223E7ERA6 249 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 E9PAM4 449 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 AP5Z1O43299 807 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 GPD1P21695 349 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SDHBP21912 280 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 CD6P30203 668 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 OXTRP30559 389 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 DPP6P42658 865 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 ID4P47928 161 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 LIMK1P53667 647 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 RPS14P62263 151 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SKOR1P84550 965 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 ZBED6P86452 979 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 RPL6Q02878 288 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 ZNF33AQ06730 810 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SCAPQ12770 1279 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 MAMLD1Q13495 774 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 PUM1Q14671 1186 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SF3A2Q15428 464 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 CDO1Q16878 200 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 DNAJC24Q6P3W2 148 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 LRSAM1Q6UWE0 723 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 KIAA1324Q6UXG2 1013 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 LRRC31Q6UY01 552 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SYT12Q8IV01 421 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SLC41A1Q8IVJ1 513 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 NETO1Q8TDF5 533 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 FRS2Q8WU20 508 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 FAM172AQ8WUF8 416 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SCG3Q8WXD2 468 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 PTPRN2Q92932 1015 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 TOE1Q96GM8 510 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 FAM129BQ96TA1 746 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 ISCUQ9H1K1 167 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 MTG2Q9H4K7 406 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 RXFP3Q9NSD7 469 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 TMEM74BQ9NUR3 256 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SEPT11Q9NVA2 429 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 IFNKQ9P0W0 207 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 EVLQ9UI08 416 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 PILRBQ9UKJ0 227 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 CAPN11Q9UMQ6 739 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 NEU3Q9UQ49 428 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 BZW2Q9Y6E2 419 aaKnown RBP11.45□□□□□ -0.58
COL4A6-205ENST00000468338 SPTBN2O15020 2390 aa11.45□□□□□ -0.58
COL4A6-205ENST00000468338 ASCC3Q8N3C0 2202 aaKnown RBP11.44□□□□□ -0.58
COL4A6-205ENST00000468338 ILVBLA1L0T0 632 aa11.44□□□□□ -0.58
COL4A6-205ENST00000468338 TTC34A8MYJ7 566 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms