RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 TFR2Q9UP52 801 aa13.94□□□□□ -0.18
SSBP1-206ENST00000467681 HS3ST2Q9Y278 367 aa13.94□□□□□ -0.18
SSBP1-206ENST00000467681 EDDM13A0A1B0GTR0 161 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 CBX4O00257 560 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 PJA2O43164 708 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 KDELR3O43731 214 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 RPP40O75818 363 aaKnown RBP13.93□□□□□ -0.18
SSBP1-206ENST00000467681 KRT7P08729 469 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 NDUFV2P19404 249 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 AMPD1P23109 780 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 IL4RP24394 825 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 ARL4AP40617 200 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 SRSF5Q13243 272 aaKnown RBP13.93□□□□□ -0.18
SSBP1-206ENST00000467681 BYSLQ13895 437 aaKnown RBP13.93□□□□□ -0.18
SSBP1-206ENST00000467681 DPYSQ14117 519 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 DLG2Q15700 870 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 LRRC38Q5VT99 294 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 IL31Q6EBC2 164 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 SH2D3CQ8N5H7 860 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 TSC1Q92574 1164 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 PTPRN2Q92932 1015 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 FAM129BQ96TA1 746 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 PHOX2BQ99453 314 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 LACRTQ9GZZ8 138 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 KLC2Q9H0B6 622 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 FBRSQ9HAH7 460 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 PRDM16Q9HAZ2 1276 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 PCDH18Q9HCL0 1135 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 ATP13A1Q9HD20 1204 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.93□□□□□ -0.18
SSBP1-206ENST00000467681 SLC25A13Q9UJS0 675 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 OTOGLQ3ZCN5 2332 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 FANCMQ8IYD8 2048 aa13.93□□□□□ -0.18
SSBP1-206ENST00000467681 BTNL10A8MVZ5 291 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 RASA4BC9J798 803 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 K7ERQ8 282 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 RASA4O43374 803 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 SIN3BO75182 1162 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 COMTP21964 271 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 GLDCP23378 1020 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 MRE11P49959 708 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 CLCN6P51797 869 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 VAV2P52735 878 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 NDST2P52849 883 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 COPAP53621 1224 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 CDH6P55285 790 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 SIM2Q14190 667 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-206ENST00000467681 KRT81Q14533 505 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 PDK2Q15119 407 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 MAP7D1Q3KQU3 841 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 PARP15Q460N3 678 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 ACCSLQ4AC99 568 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 AFMIDQ63HM1 303 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 LINGO4Q6UY18 593 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 SUMF1Q8NBK3 374 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 KCTD6Q8NC69 237 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 ACRBPQ8NEB7 543 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 RLN3Q8WXF3 142 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 NKD2Q969F2 451 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-206ENST00000467681 SIPA1Q96FS4 1042 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
SSBP1-206ENST00000467681 CSPG4P5Q96PW8 444 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 TPSD1Q9BZJ3 242 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 SLC6A17Q9H1V8 727 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 RSPH9Q9H1X1 276 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-206ENST00000467681 EPC1Q9H2F5 836 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 LRRC19Q9H756 370 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 ITM2CQ9NQX7 267 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 RCOR3Q9P2K3 495 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-206ENST00000467681 SALL4Q9UJQ4 1053 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 HPCAL4Q9UM19 191 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 INVSQ9Y283 1065 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 ALG6Q9Y672 507 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 DUSP10Q9Y6W6 482 aa13.92□□□□□ -0.18
SSBP1-206ENST00000467681 KNL1Q8NG31 2342 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 DCLK1O15075 740 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 SMAD6O43541 496 aaKnown RBP13.91□□□□□ -0.18
SSBP1-206ENST00000467681 BUB1BO60566 1050 aaPredicted RBP13.91□□□□□ -0.18
SSBP1-206ENST00000467681 ZNF217O75362 1048 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 CD160O95971 181 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 SRCP12931 536 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 P2RY2P41231 377 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 RPS14P62263 151 aaKnown RBP13.91□□□□□ -0.18
SSBP1-206ENST00000467681 ARF5P84085 180 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 ZBTB16Q05516 673 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 SERINC3Q13530 473 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 KIAA1324Q6UXG2 1013 aaKnown RBP13.91□□□□□ -0.18
SSBP1-206ENST00000467681 CEP68Q76N32 757 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 KIAA1328Q86T90 577 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 MAP7D3Q8IWC1 876 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 LRRC8AQ8IWT6 810 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 STK40Q8N2I9 435 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 LZTR1Q8N653 840 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 ATP11CQ8NB49 1132 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 TPCN2Q8NHX9 752 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 RAPGEF5Q92565 580 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 PRCCQ92733 491 aaPredicted RBP13.91□□□□□ -0.18
SSBP1-206ENST00000467681 FAM122AQ96E09 287 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 HMCESQ96FZ2 354 aa13.91□□□□□ -0.18
SSBP1-206ENST00000467681 SLC39A8Q9C0K1 460 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms