RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	ASAH2	Q9NR71	780 aa		12.56	□□□□□ -0.4
HDLBP-231	ENST00000467435	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.56	□□□□□ -0.4
HDLBP-231	ENST00000467435	SLC24A2	Q9UI40	661 aa		12.56	□□□□□ -0.4
HDLBP-231	ENST00000467435	RABGEF1	Q9UJ41	708 aa		12.56	□□□□□ -0.4
HDLBP-231	ENST00000467435	AGO1	Q9UL18	857 aa	Known RBP	12.56	□□□□□ -0.4
HDLBP-231	ENST00000467435	CPQ	Q9Y646	472 aa		12.56	□□□□□ -0.4
HDLBP-231	ENST00000467435	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	12.56	□□□□□ -0.4
HDLBP-231	ENST00000467435	TCRBV9S1A1T	A0A576	114 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	GRXCR1	A8MXD5	290 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	GRM6	O15303	877 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	PSMD3	O43242	534 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	CACNG3	O60359	315 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	RB1	P06400	928 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	CA3	P07451	260 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	GSTA2	P09210	222 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	MYL4	P12829	197 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	HDC	P19113	662 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	MGAT1	P26572	445 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	GCA	P28676	217 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	IRS1	P35568	1242 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	MMP13	P45452	471 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	SGSH	P51688	502 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	GEMIN4	P57678	1058 aa	Known RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	SESN2	P58004	480 aa	Predicted RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	YBEY	P58557	167 aa	Predicted RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	TERF2	Q15554	542 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	ADGRF1	Q5T601	910 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	KCTD11	Q693B1	232 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	GAREM2	Q75VX8	874 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	CHST9	Q7L1S5	443 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	OTOP3	Q7RTS5	596 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	TDRP	Q86YL5	185 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	MPP5	Q8N3R9	675 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	MICAL1	Q8TDZ2	1067 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	NSMCE1	Q8WV22	266 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	PPP1R2P1	Q96PQ5	205 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	XPO6	Q96QU8	1125 aa	Known RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	FCRL5	Q96RD9	977 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	EBNA1BP2	Q99848	306 aa	Known RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	CORO1B	Q9BR76	489 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	ATXN3L	Q9H3M9	355 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	RETREG1	Q9H6L5	497 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	LRRC40	Q9H9A6	602 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	GLOD4	Q9HC38	313 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	RBM22	Q9NW64	420 aa	Known RBP eCLIP	12.55	□□□□□ -0.4	5e-10	■■□□□ 12.2
HDLBP-231	ENST00000467435	PIH1D1	Q9NWS0	290 aa	Known RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	EURL	Q9NYK6	297 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	FETUB	Q9UGM5	382 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	TBK1	Q9UHD2	729 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	MAD1L1	Q9Y6D9	718 aa		12.55	□□□□□ -0.4
HDLBP-231	ENST00000467435	TRAV19	A0A0A6YYK7	116 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435		A0A1B0GVM2	712 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435		A0A1W2PRU2	124 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	TCAF2	A6NFQ2	919 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435		J3KR12	359 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	TRDMT1	O14717	391 aa	Known RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	USP12	O75317	370 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	ANXA9	O76027	345 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	PEX11B	O96011	259 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	CKM	P06732	381 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	ACVRL1	P37023	503 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	IFNAR2	P48551	515 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	GEM	P55040	296 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	RPS24	P62847	133 aa	Known RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	SLC7A9	P82251	487 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	IL10RB	Q08334	325 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	OLIG2	Q13516	323 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	SERINC3	Q13530	473 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	HNRNPD	Q14103	355 aa	Known RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	EMC10	Q5UCC4	262 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	NAPEPLD	Q6IQ20	393 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	CASC4	Q6P4E1	433 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	UNC5A	Q6ZN44	842 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	TAOK1	Q7L7X3	1001 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	KLHDC8B	Q8IXV7	354 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	MAB21L3	Q8N8X9	362 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	OR52K1	Q8NGK4	314 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	GSDMB	Q8TAX9	411 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	ADAMTS19	Q8TE59	1207 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	PABPC5	Q96DU9	382 aa	Known RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	SAMD11	Q96NU1	681 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	CYP2S1	Q96SQ9	504 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	CYTH2	Q99418	400 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	PAFAH2	Q99487	392 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	SELENOS	Q9BQE4	189 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	CASS4	Q9NQ75	786 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	SYBU	Q9NX95	663 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	PSD3	Q9NYI0	1048 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	STOML2	Q9UJZ1	356 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	LSM7	Q9UK45	103 aa	Known RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	AAR2	Q9Y312	384 aa	Known RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	PCDHA11	Q9Y5I1	949 aa		12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.54	□□□□□ -0.4
HDLBP-231	ENST00000467435	SDR42E2	A6NKP2	422 aa		12.53	□□□□□ -0.4
HDLBP-231	ENST00000467435		H3BNC9	293 aa		12.53	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms