RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ATG13O75143 517 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 HEXIM1O94992 359 aaKnown RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 FGF2P09038 288 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 SNHG28P0DPA3 235 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 CHRNB1P11230 501 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 TBXAS1P24557 533 aaPredicted RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 STAT1P42224 750 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 CDK7P50613 346 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 PNLIPRP1P54315 467 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 FOXG1P55316 489 aaPredicted RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 PPATQ06203 517 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 TRIM14Q14142 442 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 GPR162Q16538 588 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 GALNTL6Q49A17 601 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 NUGGCQ68CJ6 796 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 FAAH2Q6GMR7 532 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 DGAT2L7PQ6IED9 249 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 C4orf50Q6ZRC1 276 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 C9orf47Q6ZRZ4 202 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 B4GALNT4Q76KP1 1039 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 CACNA2D3Q8IZS8 1091 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 CHCHD4Q8N4Q1 142 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 ENDOVQ8N8Q3 282 aaKnown RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 SCAMP5Q8TAC9 235 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 IP6K1Q92551 441 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 CENPIQ92674 756 aaPredicted RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 KAT2AQ92830 837 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 C3orf49Q96BT1 292 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 ZNF419Q96HQ0 510 aaPredicted RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 PPM1MQ96MI6 270 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 PABPC3Q9H361 631 aaKnown RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 SEPSECSQ9HD40 501 aaKnown RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 SPAG4Q9NPE6 437 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 NDUFAF4Q9P032 175 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 FBXO4Q9UKT5 387 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 ISY1Q9ULR0 285 aaKnown RBP4.13□□□□□ -1.75
VPS50-209ENST00000467326 SLC45A1Q9Y2W3 748 aa4.13□□□□□ -1.75
VPS50-209ENST00000467326 LMTK3Q96Q04 1460 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 CACNA1IQ9P0X4 2223 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 NEURL1O76050 574 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 SERPINA4P29622 427 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 GRK6P43250 576 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 PCP4P48539 62 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 ADPRHP54922 357 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 PMPCAQ10713 525 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 PRKG2Q13237 762 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 PTGR1Q14914 329 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 ODF3L2Q3SX64 289 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 GLIPR1L2Q4G1C9 344 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 ALG10Q5BKT4 473 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 ALG10BQ5I7T1 473 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 SPECC1Q5M775 1068 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 C1QTNF12Q5T7M4 302 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 ASPHD1Q5U4P2 390 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 HMBOX1Q6NT76 420 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 KIAA1324Q6UXG2 1013 aaKnown RBP4.12□□□□□ -1.75
VPS50-209ENST00000467326 ANKS1BQ7Z6G8 1248 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 KLBQ86Z14 1044 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 ANKRD18AQ8IVF6 992 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 CCDC117Q8IWD4 279 aaPredicted RBP4.12□□□□□ -1.75
VPS50-209ENST00000467326 OR8H2Q8N162 312 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 IL17REQ8NFR9 667 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 STT3BQ8TCJ2 826 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 LPAR1Q92633 364 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 GCC1Q96CN9 775 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 TSPAN18Q96SJ8 248 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 ISCA1Q9BUE6 129 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 UNC45AQ9H3U1 944 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 TASP1Q9H6P5 420 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 FZD3Q9NPG1 666 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 ARL15Q9NXU5 204 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 PKP3Q9Y446 797 aa4.12□□□□□ -1.75
VPS50-209ENST00000467326 KCNJ18B7U540 433 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 GRM8O00222 908 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 MDM4O15151 490 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 RXRGP48443 463 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 HTR6P50406 440 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 CCDC38Q502W7 563 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 TANGO2Q6ICL3 276 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 LDHAL6AQ6ZMR3 332 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 KDELC2Q7Z4H8 507 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 SECISBP2LQ93073 1101 aaKnown RBP4.11□□□□□ -1.75
VPS50-209ENST00000467326 PIGSQ96S52 555 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 SERINC2Q96SA4 455 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 NPAS1Q99742 590 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 EIF2AK1Q9BQI3 630 aaKnown RBP4.11□□□□□ -1.75
VPS50-209ENST00000467326 MYLK2Q9H1R3 596 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 MAGEH1Q9H213 219 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 PDE11AQ9HCR9 933 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 GRHPRQ9UBQ7 328 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 SLC25A13Q9UJS0 675 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 ACAD8Q9UKU7 415 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 PCDHA10Q9Y5I2 948 aa4.11□□□□□ -1.75
VPS50-209ENST00000467326 LRRFIP2Q9Y608 721 aaKnown RBP4.11□□□□□ -1.75
VPS50-209ENST00000467326 HMX3A6NHT5 357 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 H0YGN5 161 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 MBD4O95243 580 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 LCKP06239 509 aa4.1□□□□□ -1.75
VPS50-209ENST00000467326 PRPH2P23942 346 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms