RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 NXPE2Q96DL1 559 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 CAMK1GQ96NX5 476 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ACAP3Q96P50 834 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 TSPAN18Q96SJ8 248 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 HNRNPABQ99729 332 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 EIF2AK1Q9BQI3 630 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 MENTQ9BUN1 341 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 TTC12Q9H892 705 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 DUS2Q9NX74 493 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 UXTQ9UBK9 157 aaPredicted RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ACSL6Q9UKU0 697 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 FRMD4BQ9Y2L6 1034 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 COQ6Q9Y2Z9 468 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 PCDHGB2Q9Y5G2 931 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 PTPRQQ9UMZ3 2332 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 COL12A1Q99715 3063 aa5.82□□□□□ -1.48
PTCD3-207ENST00000467273 ZNF638Q14966 1978 aaKnown RBP5.82□□□□□ -1.48
PTCD3-207ENST00000467273 MUC22E2RYF6 1773 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-207ENST00000467273 C7orf72A4D263 438 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 FLRT2O43155 660 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 USO1O60763 962 aaKnown RBP5.81□□□□□ -1.48
PTCD3-207ENST00000467273 DEXIO95424 95 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 NFATC1O95644 943 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 MCF2P10911 925 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 CYP3A5P20815 502 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 GDF5P43026 501 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 IFNAR2P48551 515 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PDE6CP51160 858 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 RHDQ02161 417 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 SRSF1Q07955 248 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PAK1Q13153 545 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 DHX8Q14562 1220 aaKnown RBP5.81□□□□□ -1.48
PTCD3-207ENST00000467273 ZNF77Q15935 545 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PREPLQ4J6C6 727 aaPredicted RBP5.81□□□□□ -1.48
PTCD3-207ENST00000467273 IL27RAQ6UWB1 636 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 CYP2R1Q6VVX0 501 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 LHFPL2Q6ZUX7 228 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 TRMT11Q7Z4G4 463 aaKnown RBP5.81□□□□□ -1.48
PTCD3-207ENST00000467273 TMPRSS12Q86WS5 348 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 MAB21L3Q8N8X9 362 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 IL17RCQ8NAC3 791 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 ATAD1Q8NBU5 361 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PIP4K2CQ8TBX8 421 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 SPPL2BQ8TCT7 592 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 KIFAP3Q92845 792 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 IFT74Q96LB3 600 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 C8orf48Q96LL4 319 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 ZMAT2Q96NC0 199 aaKnown RBP5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PGLYRP2Q96PD5 576 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 JMJD8Q96S16 334 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 SLC26A6Q9BXS9 759 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 CDT1Q9H211 546 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 IPPKQ9H8X2 491 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PLEKHA5Q9HAU0 1116 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PTPRHQ9HD43 1115 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PCDHA12Q9UN75 941 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 PLA2G2DQ9UNK4 145 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 CCL26Q9Y258 94 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 SCINQ9Y6U3 715 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 OBSL1O75147 1896 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 ANK1P16157 1881 aa5.81□□□□□ -1.48
PTCD3-207ENST00000467273 ATXN2Q99700 1313 aaKnown RBP5.8□□□□□ -1.48
PTCD3-207ENST00000467273 STK36Q9NRP7 1315 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 MYMKA6NI61 221 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 ZNF891A8MT65 544 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-207ENST00000467273 K7ERI5 159 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 XPOTO43592 962 aaKnown RBP5.8□□□□□ -1.48
PTCD3-207ENST00000467273 NOBOXO60393 691 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 CCNT1O60563 726 aaKnown RBP5.8□□□□□ -1.48
PTCD3-207ENST00000467273 LARGE1O95461 756 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 CER1O95813 267 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 CSH1P0DML2 217 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 CSH2P0DML3 217 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 ODC1P11926 461 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 ATF6P18850 670 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 CYP11B2P19099 503 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 CD53P19397 219 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 MUTP22033 750 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 MAN1A1P33908 653 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 OPRD1P41143 372 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 BCL6P41182 706 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 TNFRSF4P43489 277 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 CSRP3P50461 194 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 EVCP57679 992 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 GRIK2Q13002 908 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 LSAMPQ13449 338 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 DHCR24Q15392 516 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 NPY5RQ15761 445 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 ZNF568Q3ZCX4 644 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 MAP9Q49MG5 647 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 WDR45BQ5MNZ6 344 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 HLA-DQA1Q5Y7H0 255 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 TMEM150AQ86TG1 271 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 EFCAB13Q8IY85 973 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 NXPE1Q8N323 547 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 CCDC33Q8N5R6 958 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 SPATA18Q8TC71 538 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 PIGOQ8TEQ8 1089 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 RLN3Q8WXF3 142 aa5.8□□□□□ -1.48
PTCD3-207ENST00000467273 TRMT2BQ96GJ1 504 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms