RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 NPIPB4C9JG80 1138 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 GRM8O00222 908 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 HNRNPRO43390 633 aaKnown RBP4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 CNPP09543 421 aaKnown RBP4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 CSF1P09603 554 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3HP0C7X1 549 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 CKMT1AP12532 417 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 HSD3B1P14060 373 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 PRPH2P23942 346 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TNFRSF8P28908 595 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 AVPR2P30518 371 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 ACTR2P61160 394 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 ZBTB16Q05516 673 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 ASIC2Q16515 512 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 LRRC24Q50LG9 513 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3GQ6DHY5 549 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3CQ6IPX1 549 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 CYP26C1Q6V0L0 522 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 CPOQ8IVL8 374 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3Q8IZP1 549 aaPredicted RBP4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 MIB2Q96AX9 1013 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 ARRDC3Q96B67 414 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 WDR83Q9BRX9 315 aaKnown RBP4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 NTPCRQ9BSD7 190 aaKnown RBP4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 BRD8Q9H0E9 1235 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 PRDM16Q9HAZ2 1276 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 DTX4Q9Y2E6 619 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 PKP3Q9Y446 797 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 MCIDASD6RGH6 385 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 AKR1A1P14550 325 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 RHAGQ02094 409 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 CDK18Q07002 472 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 RPS6KA2Q15349 733 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 ANXA2RQ3ZCQ2 193 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 ZNF484Q5JVG2 852 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 ZNF324BQ6AW86 544 aaPredicted RBP4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 FBXL14Q8N1E6 418 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 IQCF1Q8N6M8 205 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 ENDOVQ8N8Q3 282 aaKnown RBP4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 ADPRHL1Q8NDY3 354 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 MYRIPQ8NFW9 859 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 FAM110DQ8TAY7 271 aaPredicted RBP4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 GCC1Q96CN9 775 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 PIGSQ96S52 555 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 PSMD1Q99460 953 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 POLR3GLQ9BT43 218 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 FAM167BQ9BTA0 163 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 OSBPL5Q9H0X9 879 aaPredicted RBP4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 RBM38Q9H0Z9 239 aaKnown RBP4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 PDE11AQ9HCR9 933 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 IPO11Q9UI26 975 aaKnown RBP4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 GJD2Q9UKL4 321 aa4.88□□□□□ -1.63
PRPF40A-205ENST00000467114 LYL1P12980 280 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 ARSAP15289 507 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 PDCLQ13371 301 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 VWA5B1Q5TIE3 1220 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 ISM2Q6H9L7 571 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 MTFR2Q6P444 385 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 DHRS13Q6UX07 377 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 BBS12Q6ZW61 710 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 KAT2AQ92830 837 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 EME1Q96AY2 570 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 PPP1R10Q96QC0 940 aaKnown RBP4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 TWNKQ96RR1 684 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 ABHD14AQ9BUJ0 271 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 HDHD5Q9BXW7 423 aa4.87□□□□□ -1.63
PRPF40A-205ENST00000467114 A6NNC1 897 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 TNFRSF13BO14836 293 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 IRAK2O43187 625 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 PNPLA4P41247 253 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 AARSP49588 968 aaKnown RBP eCLIP4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 CCR5P51681 352 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 MVDP53602 400 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 THOC5Q13769 683 aaKnown RBP4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 PKP1Q13835 747 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 C6orf10Q5SRN2 563 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 LIPMQ5VYY2 423 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 SPATA2LQ8IUW3 424 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 SCN4BQ8IWT1 228 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 TRIM2Q9C040 744 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 RMI1Q9H9A7 625 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 CHODLQ9H9P2 273 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 Q9N2J8 555 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 SPAG4Q9NPE6 437 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 TMEM248Q9NWD8 314 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 DNAJC16Q9Y2G8 782 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 DERAQ9Y315 318 aa4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 ARID4BQ4LE39 1312 aaPredicted RBP4.86□□□□□ -1.63
PRPF40A-205ENST00000467114 SAC3D1A6NKF1 404 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 KRT38O76015 456 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 IFNA2P01563 188 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 CHRNB1P11230 501 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 HOXB9P17482 250 aaPredicted RBP4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 PCP4P48539 62 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 RNASELQ05823 741 aaKnown RBP4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 ZRSR2Q15696 482 aaKnown RBP4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 CAPRIN2Q6IMN6 1127 aaKnown RBP4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 TMEM200AQ86VY9 491 aa4.85□□□□□ -1.63
PRPF40A-205ENST00000467114 FAM47BQ8NA70 645 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms