RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 HMCESQ96FZ2 354 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 C16orf45Q96MC5 204 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 HERPUD2Q9BSE4 406 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 FRMD8P1Q9BZ68 369 aaPredicted RBP15.54■□□□□ 0.08
NPHP4-205ENST00000466897 BRD8Q9H0E9 1235 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 ATP13A1Q9HD20 1204 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 ELOVL2Q9NXB9 296 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 HPCAL4Q9UM19 191 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 MFHAS1Q9Y4C4 1052 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 BDP1A6H8Y1 2624 aa15.54■□□□□ 0.08
NPHP4-205ENST00000466897 ZNF189O75820 626 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 ZMPSTE24O75844 475 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 SRPRAP08240 638 aaKnown RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 DLDP09622 509 aaKnown RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 CASQ1P31415 396 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 ACVRL1P37023 503 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 GARSP41250 739 aaKnown RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 KIR2DL1P43626 348 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 PAPOLAP51003 745 aaKnown RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 MRPS21P82921 87 aaKnown RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 SLC20A2Q08357 652 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 SLC10A2Q12908 348 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 XRCC4Q13426 336 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 LRRC32Q14392 662 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 NOMO1Q15155 1222 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 IL31Q6EBC2 164 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 RETSATQ6NUM9 610 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 SYT10Q6XYQ8 523 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 TRIM67Q6ZTA4 783 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 ACTRT1Q8TDG2 376 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 MAIP1Q8WWC4 291 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 CASKIN2Q8WXE0 1202 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 P3H4Q92791 437 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 CELF6Q96J87 481 aaKnown RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 TSGA13Q96PP4 275 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 NAP1L3Q99457 506 aaPredicted RBP15.53■□□□□ 0.08
NPHP4-205ENST00000466897 HEMGNQ9BXL5 484 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 TBC1D17Q9HA65 648 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 PDFQ9HBH1 243 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 VPS51Q9UID3 782 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 HS3ST2Q9Y278 367 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 SAR1BQ9Y6B6 198 aa15.53■□□□□ 0.08
NPHP4-205ENST00000466897 PPP1R12AO14974 1030 aaPredicted RBP15.52■□□□□ 0.08
NPHP4-205ENST00000466897 CEP104O60308 925 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 PRAMEF11O60813 436 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 EGFP01133 1207 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 CHRNB1P11230 501 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 TARSP26639 723 aaKnown RBP15.52■□□□□ 0.08
NPHP4-205ENST00000466897 CXCR5P32302 372 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 CLCN6P51797 869 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 DYNLT1P63172 113 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 ARF5P84085 180 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 ECT2LQ008S8 904 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 IL10RBQ08334 325 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 PPIDQ08752 370 aaKnown RBP15.52■□□□□ 0.08
NPHP4-205ENST00000466897 ENPP2Q13822 863 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 PDK1Q15118 436 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 TIGD7Q6NT04 549 aaPredicted RBP15.52■□□□□ 0.08
NPHP4-205ENST00000466897 TRMT11Q7Z4G4 463 aaKnown RBP15.52■□□□□ 0.08
NPHP4-205ENST00000466897 ATPAF2Q8N5M1 289 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 PJA1Q8NG27 643 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 ZNF599Q96NL3 588 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 IER2Q9BTL4 223 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 CIPCQ9C0C6 399 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 THAP10Q9P2Z0 257 aaPredicted RBP15.52■□□□□ 0.08
NPHP4-205ENST00000466897 RNF14Q9UBS8 474 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 SLC25A13Q9UJS0 675 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 HEY1Q9Y5J3 304 aa15.52■□□□□ 0.08
NPHP4-205ENST00000466897 ATG2BQ96BY7 2078 aa15.52■□□□□ 0.07
NPHP4-205ENST00000466897 HACD1B0YJ81 288 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 CBX4O00257 560 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 DFFAO00273 331 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 ZNF500O60304 480 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-205ENST00000466897 MAFKO60675 156 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 PECAM1P16284 738 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-205ENST00000466897 CD72P21854 359 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 CCNCP24863 283 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 MAGEA9P43362 315 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 RPS9P46781 194 aaKnown RBP15.51■□□□□ 0.07
NPHP4-205ENST00000466897 FZD5Q13467 585 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 RFTN1Q14699 578 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-205ENST00000466897 PTPRNQ16849 979 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 INO80DQ53TQ3 878 aaPredicted RBP15.51■□□□□ 0.07
NPHP4-205ENST00000466897 TMCO4Q5TGY1 634 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 SFTPA1Q8IWL2 248 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 TP53INP2Q8IXH6 220 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 COG1Q8WTW3 980 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 CLDN23Q96B33 292 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 MYO19Q96H55 970 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 MRGPRX3Q96LB0 322 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 SPON2Q9BUD6 331 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 IPO11Q9UI26 975 aaKnown RBP15.51■□□□□ 0.07
NPHP4-205ENST00000466897 HCN2Q9UL51 889 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 PLA2G4CQ9UP65 541 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 ERVW-1Q9UQF0 538 aa15.51■□□□□ 0.07
NPHP4-205ENST00000466897 CHURC1-FNTBB4DL54 471 aa15.5■□□□□ 0.07
NPHP4-205ENST00000466897 PGRMC1O00264 195 aaKnown RBP15.5■□□□□ 0.07
NPHP4-205ENST00000466897 ATP9BO43861 1147 aa15.5■□□□□ 0.07
NPHP4-205ENST00000466897 SNAP91O60641 907 aa15.5■□□□□ 0.07
NPHP4-205ENST00000466897 CD160O95971 181 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms