RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PRKAA2P54646 552 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 STK40Q8N2I9 435 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 ASAH2Q9NR71 780 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 VAV3Q9UKW4 847 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 SPATA2Q9UM82 520 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 USP2O75604 605 aaPredicted RBP8.85□□□□□ -0.99
HPS4-209ENST00000466781 GYPCP04921 128 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 ACADSP16219 412 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 PSMB9P28065 219 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 GIT2Q14161 759 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 SEC23AQ15436 765 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 RAET1GQ6H3X3 334 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 SLC47A2Q86VL8 602 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 EMC1Q8N766 993 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 GRIN3AQ8TCU5 1115 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 KLRG1Q96E93 195 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 ERGIC2Q96RQ1 377 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 ZNF304Q9HCX3 659 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 NEUROD4Q9HD90 331 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 RNF19AQ9NV58 838 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 ZNHIT2Q9UHR6 403 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 MRPL42Q9Y6G3 142 aaKnown RBP8.85□□□□□ -0.99
HPS4-209ENST00000466781 MORC2Q9Y6X9 1032 aaPredicted RBP8.85□□□□□ -0.99
HPS4-209ENST00000466781 WDR27A2RRH5 827 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 URADA6NGE7 173 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 BTN3A1O00481 513 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 EPN2O95208 641 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 COX7A2P14406 83 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 DGKAP23743 735 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 DET1Q7L5Y6 550 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 BRSK2Q8IWQ3 736 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 ACTRT2Q8TDY3 377 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 CASKIN2Q8WXE0 1202 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 CLIP3Q96DZ5 547 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 APOL4Q9BPW4 351 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 BATF3Q9NR55 127 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 CATSPERZQ9NTU4 200 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 OPTCQ9UBM4 332 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 GNPTGQ9UJJ9 305 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 NFASCO94856 1347 aa8.85□□□□□ -0.99
HPS4-209ENST00000466781 AP3D1O14617 1153 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SMIM10L2AP0DMW4 78 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SMIM10L2BP0DMW5 78 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 TPH1P17752 444 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 CXCR2P25025 360 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 TKTP29401 623 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 MMP13P45452 471 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SLC1A6P48664 564 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SNRPD1P62314 119 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 PTSQ03393 145 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 RGS1Q08116 209 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 CNGA2Q16280 664 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 ARMC4Q5T2S8 1044 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SPRYD7Q5W111 196 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 FAAH2Q6GMR7 532 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 RPTNQ6XPR3 784 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 MARK2Q7KZI7 788 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 FAM126AQ9BYI3 521 aaPredicted RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 IRX2Q9BZI1 471 aaPredicted RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 KLHL4Q9C0H6 718 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 BCLAF3A2AJT9 711 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 PPP1R3GB7ZBB8 358 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 PROSCO94903 275 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 PGK1P00558 417 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 MYBL2P10244 700 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 BGNP21810 368 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 RPA3P35244 121 aaPredicted RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 NR2C2P49116 596 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 NDUFV1P49821 464 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 MRPS6P82932 125 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 ITIH4Q14624 930 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 NDUFAF6Q330K2 333 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 KRT73Q86Y46 540 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 OR52L1Q8NGH7 329 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 UBE2E3Q969T4 207 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 NSMCE2Q96MF7 247 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 GAS2L1Q99501 681 aaPredicted RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 ZCCHC17Q9NP64 241 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 ABCC13Q9NSE7 274 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 PAIP2BQ9ULR5 123 aaKnown RBP8.84□□□□□ -0.99
HPS4-209ENST00000466781 NDUFAF1Q9Y375 327 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 HACD1B0YJ81 288 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 BTBD19C9JJ37 291 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 CALB2P22676 271 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 GSTM5P46439 218 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 TMEM86AQ8N2M4 240 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 KLHL23Q8NBE8 558 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 ZFP28Q8NHY6 868 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 CYP2W1Q8TAV3 490 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 MDM1Q8TC05 714 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 ELMO1Q92556 727 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 CNPPD1Q9BV87 410 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 FAIM2Q9BWQ8 316 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 UGT2B28Q9BY64 529 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 CEP41Q9BYV8 373 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 PRRG4Q9BZD6 226 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 SLC39A8Q9C0K1 460 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 PIGUQ9H490 435 aa8.84□□□□□ -0.99
HPS4-209ENST00000466781 POMKQ9H5K3 350 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms