RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 STEAP4Q687X5 459 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 CASC4Q6P4E1 433 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 OTOP3Q7RTS5 596 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 PRPF39Q86UA1 669 aaKnown RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 DENND1CQ8IV53 801 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 OR52K1Q8NGK4 314 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 PHOSPHO2Q8TCD6 241 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 SLC44A1Q8WWI5 657 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 ARNTL2Q8WYA1 636 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 OXNAD1Q96HP4 312 aaPredicted RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 FCRL5Q96RD9 977 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 KLF16Q9BXK1 252 aaPredicted RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 RETREG1Q9H6L5 497 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 GLOD4Q9HC38 313 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 ZNF334Q9HCZ1 680 aaPredicted RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 CASS4Q9NQ75 786 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 COLQQ9Y215 455 aaPredicted RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 MTCL1Q9Y4B5 1905 aaKnown RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 TMEM120BA0PK00 339 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 LCHNA4D1U4 455 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 USP12O75317 370 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 PEX11BO96011 259 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 F11P03951 625 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 OR1E1P30953 314 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 CORO1AP31146 461 aaKnown RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 IFNAR2P48551 515 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 CRADDP78560 199 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 OLIG2Q13516 323 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 HNRNPDQ14103 355 aaKnown RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 PABPC1LQ4VXU2 614 aaKnown RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 LILRA6Q6PI73 481 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 PPP1R2P1Q96PQ5 205 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 TRIM56Q9BRZ2 755 aaKnown RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 IL21Q9HBE4 155 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 GKN1Q9NS71 199 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 RBM22Q9NW64 420 aaKnown RBP eCLIP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 AAR2Q9Y312 384 aaKnown RBP21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 IKBKGQ9Y6K9 419 aa21.56■■□□□ 1.04
PPP1R3F-203ENST00000466508 SRRM3A6NNA2 597 aaPredicted RBP21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 PSMD3O43242 534 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 KLKB1P03952 638 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 HLA-DQB2P05538 268 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 PGAM1P18669 254 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 YBEYP58557 167 aaPredicted RBP21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 POLD3Q15054 466 aaPredicted RBP21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 RFWD3Q6PCD5 774 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 CYS1Q717R9 158 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 LRRC6Q86X45 466 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 TCF25Q9BQ70 676 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 SYBUQ9NX95 663 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 LZTS1Q9Y250 596 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 IRAK3Q9Y616 596 aa21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 RANBP2P49792 3224 aaKnown RBP21.55■■□□□ 1.04
PPP1R3F-203ENST00000466508 ANXA9O76027 345 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 INHBAP08476 426 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 CTNNB1P35222 781 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 BMPR1AP36894 532 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 RABGAP1LQ5R372 815 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 NAPEPLDQ6IQ20 393 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 DNAAF3Q8N9W5 541 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 KLHL5Q96PQ7 755 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 SP110Q9HB58 689 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 INTS9Q9NV88 658 aaKnown RBP21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 UBP1Q9NZI7 540 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 MIA3Q5JRA6 1907 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 CHD7Q9P2D1 2997 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 NEBLO76041 1014 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 RENBPP51606 427 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 TRMT10BQ6PF06 316 aaKnown RBP21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 CCDC149Q6ZUS6 474 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 LINC00523Q86TU6 105 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 CFAP52Q8N1V2 620 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 ATXN2LQ8WWM7 1075 aaKnown RBP21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 EPN3Q9H201 632 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 TRABDQ9H4I3 376 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 MOCS1Q9NZB8 636 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 BFARQ9NZS9 450 aa21.54■■□□□ 1.04
PPP1R3F-203ENST00000466508 FAM159BA6NKW6 160 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 J3KR12 359 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 AP3B1O00203 1094 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 ALDH1A2O94788 518 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 OLFM2O95897 454 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 LRG1P02750 347 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 ERVFC1P60507 584 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 DMTNQ08495 405 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 SERINC3Q13530 473 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 ADGRF1Q5T601 910 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 SLC26A11Q86WA9 606 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 CTAGE3PQ8IX95 158 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 PPM1NQ8N819 430 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 SPATA22Q8NHS9 363 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 MZB1Q8WU39 189 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 ZFRQ96KR1 1074 aaKnown RBP21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 PRICKLE1Q96MT3 831 aaPredicted RBP21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 EMILIN2Q9BXX0 1053 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 TRPC7Q9HCX4 862 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 ALG13Q9NP73 1137 aaKnown RBP21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 KCNK9Q9NPC2 374 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 ENTPD7Q9NQZ7 604 aa21.53■■□□□ 1.04
PPP1R3F-203ENST00000466508 SAMD15Q9P1V8 674 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms