RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 AAK1Q2M2I8 961 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 KLHDC7AQ5VTJ3 777 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 HEPHL1Q6MZM0 1159 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 MDGA2Q7Z553 956 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 EXD3Q8N9H8 876 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 LRRC57Q8N9N7 239 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 CMASQ8NFW8 434 aaPredicted RBP2.44□□□□□ -2.02
CCDC93-205ENST00000466171 REXO5Q96IC2 774 aaKnown RBP2.44□□□□□ -2.02
CCDC93-205ENST00000466171 GFM1Q96RP9 751 aaKnown RBP2.44□□□□□ -2.02
CCDC93-205ENST00000466171 TBCBQ99426 244 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 PSMD1Q99460 953 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 NAA15Q9BXJ9 866 aaKnown RBP2.44□□□□□ -2.02
CCDC93-205ENST00000466171 PCGF6Q9BYE7 350 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.44□□□□□ -2.02
CCDC93-205ENST00000466171 ABHD16BQ9H3Z7 469 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 KLHL31Q9H511 634 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 DDX21Q9NR30 783 aaKnown RBP eCLIP2.44□□□□□ -2.02
CCDC93-205ENST00000466171 OCIAD1Q9NX40 245 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 DONSONQ9NYP3 566 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 MYO1AQ9UBC5 1043 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 FBXO4Q9UKT5 387 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 NFU1Q9UMS0 254 aa2.44□□□□□ -2.02
CCDC93-205ENST00000466171 CYP3A7-CYP3A51PA0A087WV96 503 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3DA0A087WVF3 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3IA0A087WXS9 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3EA0A087X179 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3KA0A087X1G2 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TRBV5-7A0A0A0MS05 114 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3BA6NDS4 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3FA6NER0 549 aaPredicted RBP2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3LB9A6J9 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 APOL1O14791 398 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TPD52L2O43399 206 aaKnown RBP2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TAF5LO75529 589 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3HP0C7X1 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 CYP3A7P24462 503 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 ITGB8P26012 769 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 GABRB3P28472 473 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 C21orf33P30042 268 aaPredicted RBP2.43□□□□□ -2.02
CCDC93-205ENST00000466171 PEX5P50542 639 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 CYP2J2P51589 502 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TMPRSS3P57727 454 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 ZNF543Q08ER8 600 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 RBM39Q14498 530 aaKnown RBP2.43□□□□□ -2.02
CCDC93-205ENST00000466171 HNF4GQ14541 408 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 LONRF1Q17RB8 773 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 PLEKHO1Q53GL0 409 aaPredicted RBP2.43□□□□□ -2.02
CCDC93-205ENST00000466171 ARL13AQ5H913 290 aaPredicted RBP2.43□□□□□ -2.02
CCDC93-205ENST00000466171 ZNF569Q5MCW4 686 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3GQ6DHY5 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 HIST2H2BCQ6DN03 193 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 CYB5RLQ6IPT4 315 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3CQ6IPX1 549 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 ZNF449Q6P9G9 518 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 FBXO38Q6PIJ6 1188 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 MON1BQ7L1V2 547 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 ANKS1BQ7Z6G8 1248 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 DCUN1D3Q8IWE4 304 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TBC1D3Q8IZP1 549 aaPredicted RBP2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TXLNBQ8N3L3 684 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 SVIPQ8NHG7 77 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 WDR60Q8WVS4 1066 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 ADGRG7Q96K78 797 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TNIP3Q96KP6 325 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 SLC25A33Q9BSK2 321 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 COLEC11Q9BWP8 271 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 TMEM120AQ9BXJ8 343 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 CHMP4AQ9BY43 222 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 RGL1Q9NZL6 768 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 PHTF1Q9UMS5 762 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 SLC12A4Q9UP95 1085 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 DAAM1Q9Y4D1 1078 aa2.43□□□□□ -2.02
CCDC93-205ENST00000466171 SAA2-SAA4A0A096LPE2 208 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 ANO9A1A5B4 782 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 LINC01553A4QN01 128 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 ANTXRLA6NF34 631 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 EYA2O00167 538 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 KPNA5O15131 536 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 ITM2AO43736 263 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 LMX1BO60663 402 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 TMCC1O94876 653 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 NDST3O95803 873 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 GLP2RO95838 553 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 LDHAP00338 332 aaKnown RBP2.42□□□□□ -2.02
CCDC93-205ENST00000466171 HLA-DQA2P01906 255 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 CYP3A4P08684 503 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 SLC5A1P13866 664 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 AMD1P17707 334 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 GNLYP22749 145 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 ANOS1P23352 680 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 SERPINB3P29508 390 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 PIK3CBP42338 1070 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 STT3AP46977 705 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 PPP3CCP48454 512 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 VEGFCP49767 419 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 OAZ1P54368 228 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 CDH12P55289 794 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 RHAGQ02094 409 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 SNTA1Q13424 505 aa2.42□□□□□ -2.02
CCDC93-205ENST00000466171 SF3B4Q15427 424 aaKnown RBP eCLIP2.42□□□□□ -2.028e-7■■■■■ 32.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms