RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PTK6Q13882 451 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 PDK2Q15119 407 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 PPP1R7Q15435 360 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 ZNF423Q2M1K9 1284 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 MDH1BQ5I0G3 518 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 TTC27Q6P3X3 843 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 CEP128Q6ZU80 1094 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 HDDC3Q8N4P3 179 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 EMC1Q8N766 993 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 TXNDC5Q8NBS9 432 aaKnown RBP14.26□□□□□ -0.13
HDAC6-215ENST00000465457 MYCBPAPQ8TBZ2 947 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 HMGB4Q8WW32 186 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 ATP2A3Q93084 1043 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 RNF25Q96BH1 459 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-215ENST00000465457 RUFY1Q96T51 708 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 PRDM16Q9HAZ2 1276 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 LRRC4Q9HBW1 653 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 PNPLA8Q9NP80 782 aa14.26□□□□□ -0.13
HDAC6-215ENST00000465457 MUC22E2RYF6 1773 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 TCRBV7S2A1N4TA0A589 114 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 C2orf78A6NCI8 922 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 GOLGA6BA6NDN3 693 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 ZSCAN5CA6NGD5 496 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 MDM4O15151 490 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 MAP3K13O43283 966 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 DAPK3O43293 454 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 OPHN1O60890 802 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 ADAM23O75077 832 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 DAB1O75553 588 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 KLF8O95600 359 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 TRUB2O95900 331 aaKnown RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 RDXP35241 583 aaKnown RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 ATXN3P54252 364 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 MRPS25P82663 173 aaKnown RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 TSPY1Q01534 308 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 CALCOCO2Q13137 446 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 TFDP2Q14188 446 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 CFAP58Q5T655 872 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 EMC10Q5UCC4 262 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 MFSD7Q6UXD7 560 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 BBS12Q6ZW61 710 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 STRADAQ7RTN6 431 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 FAM35AQ86V20 835 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 C12orf40Q86WS4 652 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 PSTKQ8IV42 348 aaKnown RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 GSPT2Q8IYD1 628 aaKnown RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 SIX6OS1Q8N1H7 587 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 CCDC89Q8N998 374 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 IL17RCQ8NAC3 791 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 FAM71BQ8TC56 605 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 ADAMTS14Q8WXS8 1223 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 MRPS31Q92665 395 aaKnown RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 SMARCD1Q96GM5 515 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 FMO2Q99518 471 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 ZWILCHQ9H900 591 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 TMEM51Q9NW97 253 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 RRN3Q9NYV6 651 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 WHRNQ9P202 907 aa14.25□□□□□ -0.13
HDAC6-215ENST00000465457 DRG1Q9Y295 367 aaKnown RBP14.25□□□□□ -0.13
HDAC6-215ENST00000465457 TULP2O00295 520 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 OPA1O60313 960 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 CKMP06732 381 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 KDELR1P24390 212 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 DDX6P26196 483 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC6-215ENST00000465457 ECHS1P30084 290 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 TIE1P35590 1138 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 FLT3P36888 993 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 SLC6A11P48066 632 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 TRIP6Q15654 476 aaKnown RBP14.24□□□□□ -0.13
HDAC6-215ENST00000465457 DDR2Q16832 855 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 CCDC14Q49A88 953 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 INTS6LQ5JSJ4 861 aaKnown RBP14.24□□□□□ -0.13
HDAC6-215ENST00000465457 CLEC20AQ6ZU45 233 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 SLCO6A1Q86UG4 719 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 PIGZQ86VD9 579 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 SCUBE3Q8IX30 993 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 SCML4Q8N228 414 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 ARL14EPQ8N8R7 260 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-215ENST00000465457 KCTD6Q8NC69 237 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 SPPL2BQ8TCT7 592 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 SH3RF2Q8TEC5 729 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 C1orf54Q8WWF1 131 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 CENPIQ92674 756 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-215ENST00000465457 SPACA7Q96KW9 195 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 TRIM51Q9BSJ1 452 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 HEMGNQ9BXL5 484 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 CRTAC1Q9NQ79 661 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 CNGB3Q9NQW8 809 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 KRT82Q9NSB4 513 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC6-215ENST00000465457 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDAC6-215ENST00000465457 STAP1Q9ULZ2 295 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 SLC6A14Q9UN76 642 aa14.24□□□□□ -0.13
HDAC6-215ENST00000465457 PTPRQQ9UMZ3 2332 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 TCRBV21S2A2A0A5A6 115 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 C3orf70A6NLC5 250 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-215ENST00000465457 EIF4E1BA6NMX2 242 aaKnown RBP14.23□□□□□ -0.13
HDAC6-215ENST00000465457 HCRTO43612 131 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 LIASO43766 372 aa14.23□□□□□ -0.13
HDAC6-215ENST00000465457 GJB3O75712 270 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms