RNA–Protein interactions for RNA: ENST00000465409.1

CUEDC2-202, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-202ENST00000465409 PGBD3Q8N328 593 aa13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 GPR161Q8N6U8 529 aaKnown RBP13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 FRS2Q8WU20 508 aa13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 SIPA1Q96FS4 1042 aa13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 CCDC114Q96M63 670 aa13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 PEBP4Q96S96 227 aa13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 PCED1AQ9H1Q7 454 aa13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 ATP13A1Q9HD20 1204 aa13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 ZDHHC4Q9NPG8 344 aa13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 POLR3BQ9NW08 1133 aaPredicted RBP13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
CUEDC2-202ENST00000465409 MCF2LO15068 1137 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 FOXD2O60548 495 aaPredicted RBP13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 LRP3O75074 770 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 ACADMP11310 421 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 NDUFV2P19404 249 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 PXNP49023 591 aaPredicted RBP13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 DLG2Q15700 870 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 ELF2Q15723 593 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 TMCO4Q5TGY1 634 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 IL31Q6EBC2 164 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 USP30Q70CQ3 517 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 CEP68Q76N32 757 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 DSG4Q86SJ6 1040 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 CCDC112Q8NEF3 446 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 PTPRN2Q92932 1015 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 SPON2Q9BUD6 331 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 MAGEB5Q9BZ81 275 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 MKRN2Q9H000 416 aaKnown RBP13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 OSGEPQ9NPF4 335 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 FAM86C1Q9NVL1 165 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 CWC15Q9P013 229 aaKnown RBP13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 USP36Q9P275 1121 aaKnown RBP13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 DNAI1Q9UI46 699 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 VPS51Q9UID3 782 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 TPX2Q9ULW0 747 aaKnown RBP13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 PCDHGA5Q9Y5G8 931 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 RAD54BQ9Y620 910 aa13.43□□□□□ -0.26
CUEDC2-202ENST00000465409 CKAP5Q14008 2032 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 PRR23AA6NEV1 266 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 GOLGA6L3A6NEY3 463 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 PJA2O43164 708 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 RETP07949 1114 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 SRCP12931 536 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 HLA-EP13747 358 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 GOT1P17174 413 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 ERCC2P18074 760 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 CTSOP43234 321 aaPredicted RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 RPS14P62263 151 aaKnown RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 CCDC15Q0P6D6 951 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 SERINC3Q13530 473 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 DPYSQ14117 519 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 CA9Q16790 459 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 PPP6R3Q5H9R7 873 aaPredicted RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 FAM46CQ5VWP2 391 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 AFMIDQ63HM1 303 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 ZNF776Q68DI1 518 aaPredicted RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 KBTBD6Q86V97 674 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 TMEM139Q8IV31 216 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 PCDH20Q8N6Y1 951 aaKnown RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 ATP11CQ8NB49 1132 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 CADM4Q8NFZ8 388 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 OR7D4Q8NG98 312 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 TSC1Q92574 1164 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 RUBCNQ92622 972 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 LRIG1Q96JA1 1093 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 BTBD6Q96KE9 485 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 RPL10LQ96L21 214 aaKnown RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 KCTD15Q96SI1 283 aaPredicted RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 FAM129BQ96TA1 746 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 DUSP15Q9H1R2 295 aaPredicted RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 NOL6Q9H6R4 1146 aaKnown RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 LRRC19Q9H756 370 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 NDFIP2Q9NV92 336 aa13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 SMG5Q9UPR3 1016 aaKnown RBP13.42□□□□□ -0.26
CUEDC2-202ENST00000465409 MUC22E2RYF6 1773 aaPredicted RBP13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 ARHGAP42A6NI28 874 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 SOWAHDA6NJG2 315 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 TTC34A8MYJ7 566 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 CBX4O00257 560 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 MAP3K13O43283 966 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 SIN3BO75182 1162 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 ADH1BP00325 375 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 DNTTP04053 509 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 C5AR1P21730 350 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 SERPINB6P35237 376 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 SERPINH1P50454 418 aaKnown RBP13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 ARSEP51690 589 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 MESDQ14696 234 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 IFI16Q16666 785 aaKnown RBP13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 PLK5Q496M5 336 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 TTC31Q49AM3 519 aaPredicted RBP13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 KCNT1Q5JUK3 1230 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 LPCAT2Q7L5N7 544 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 SPC24Q8NBT2 197 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 TMIEQ8NEW7 156 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 OR8D1Q8WZ84 308 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 CSPG4P5Q96PW8 444 aa13.41□□□□□ -0.26
CUEDC2-202ENST00000465409 ZNF670Q9BS34 389 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms