RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 FZD10Q9ULW2 581 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 SLC6A14Q9UN76 642 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 AP4E1Q9UPM8 1137 aa17.94■□□□□ 0.46
CPSF4-209ENST00000465132 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.94■□□□□ 0.46
CPSF4-209ENST00000465132 IGHV1OR15-9A0A0B4J2B8 117 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 CCDC66A2RUB6 948 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 PRRT4C9JH25 899 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 ZBTB24O43167 697 aaPredicted RBP17.93■□□□□ 0.46
CPSF4-209ENST00000465132 ZNF217O75362 1048 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 SERPINF2P08697 491 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 CISD3P0C7P0 127 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 NDUFV2P19404 249 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 L1CAMP32004 1257 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 ARL4AP40617 200 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 ZNF33AQ06730 810 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 SEMA3BQ13214 749 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 MS4A13Q5J8X5 152 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 KIAA1211LQ6NV74 962 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 PIP4P1Q86T03 277 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 DDI1Q8WTU0 396 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 SCNM1Q9BWG6 230 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 SLC2A11Q9BYW1 496 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 ADAM33Q9BZ11 813 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 SLC32A1Q9H598 525 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 PRDM16Q9HAZ2 1276 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 CAPN10Q9HC96 672 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 FSCN3Q9NQT6 498 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 RCOR3Q9P2K3 495 aaPredicted RBP17.93■□□□□ 0.46
CPSF4-209ENST00000465132 DUSP10Q9Y6W6 482 aa17.93■□□□□ 0.46
CPSF4-209ENST00000465132 MYO18AQ92614 2054 aaKnown RBP17.93■□□□□ 0.46
CPSF4-209ENST00000465132 UPK3BL1B0FP48 263 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 UPK3BL2E5RIL1 263 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 FGF10O15520 208 aaPredicted RBP17.92■□□□□ 0.46
CPSF4-209ENST00000465132 DAPK3O43293 454 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 COMTP21964 271 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 DGKGP49619 791 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 AUHQ13825 339 aaKnown RBP17.92■□□□□ 0.46
CPSF4-209ENST00000465132 KRT81Q14533 505 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 RABEPKQ7Z6M1 372 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 VSIG1Q86XK7 387 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 KDF1Q8NAX2 398 aaPredicted RBP17.92■□□□□ 0.46
CPSF4-209ENST00000465132 KCTD6Q8NC69 237 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 ERLEC1Q96DZ1 483 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 RPRD1AQ96P16 312 aaPredicted RBP17.92■□□□□ 0.46
CPSF4-209ENST00000465132 GTPBP2Q9BX10 602 aaKnown RBP17.92■□□□□ 0.46
CPSF4-209ENST00000465132 DHX35Q9H5Z1 703 aaKnown RBP17.92■□□□□ 0.46
CPSF4-209ENST00000465132 CATSPERBQ9H7T0 1116 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 KCND1Q9NSA2 647 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 PPARGC1AQ9UBK2 798 aaKnown RBP17.92■□□□□ 0.46
CPSF4-209ENST00000465132 ZMIZ1Q9ULJ6 1067 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 CYP8B1Q9UNU6 501 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 TFR2Q9UP52 801 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 RAD54BQ9Y620 910 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 HS3ST4Q9Y661 456 aa17.92■□□□□ 0.46
CPSF4-209ENST00000465132 ASCC3Q8N3C0 2202 aaKnown RBP17.91■□□□□ 0.46
CPSF4-209ENST00000465132 H3BRJ5 948 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 CLDN11O75508 207 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 PALMO75781 387 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 MOCS3O95396 460 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 HCAR3P49019 387 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 ATXN3P54252 364 aaPredicted RBP17.91■□□□□ 0.46
CPSF4-209ENST00000465132 FAM133BQ5BKY9 247 aaKnown RBP17.91■□□□□ 0.46
CPSF4-209ENST00000465132 PIK3R6Q5UE93 754 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 RAP1GAP2Q684P5 730 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 SLC41A1Q8IVJ1 513 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 LGI2Q8N0V4 545 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 CCAR2Q8N163 923 aaKnown RBP17.91■□□□□ 0.46
CPSF4-209ENST00000465132 CCDC185Q8N715 623 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 TBC1D31Q96DN5 1066 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 P2RY11Q96G91 374 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 ZYG11BQ9C0D3 744 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 CACNA2D2Q9NY47 1150 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 FBXO10Q9UK96 956 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 GON4LQ3T8J9 2241 aa17.91■□□□□ 0.46
CPSF4-209ENST00000465132 A0A1B0GVM2 712 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 SPAARA0A1B0GVQ0 90 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 TCAF2A6NFQ2 919 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 E9PAM4 449 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 GFRA2O00451 464 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 SRGAP2O75044 1071 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 CDH4P55283 916 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 TPI1P60174 286 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 SLC25A11Q02978 314 aaKnown RBP17.9■□□□□ 0.46
CPSF4-209ENST00000465132 DPYSL2Q16555 572 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 C5orf22Q49AR2 442 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 CHST9Q7L1S5 443 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 HDDC3Q8N4P3 179 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 ARFGAP1Q8N6T3 406 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 LRRC57Q8N9N7 239 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 HSPH1Q92598 858 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 GATA6Q92908 595 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 BHMTQ93088 406 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 RBM41Q96IZ5 413 aaKnown RBP17.9■□□□□ 0.46
CPSF4-209ENST00000465132 MRGPRX1Q96LB2 322 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 HSPA12BQ96MM6 686 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 PRMT1Q99873 361 aaKnown RBP17.9■□□□□ 0.46
CPSF4-209ENST00000465132 SNRNP25Q9BV90 132 aaKnown RBP17.9■□□□□ 0.46
CPSF4-209ENST00000465132 SLC6A17Q9H1V8 727 aa17.9■□□□□ 0.46
CPSF4-209ENST00000465132 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.9■□□□□ 0.46
CPSF4-209ENST00000465132 PLK2Q9NYY3 685 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms