RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 GJD4Q96KN9 370 aaPredicted RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 AGAP3Q96P47 875 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 RANBP9Q96S59 729 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 KCTD15Q96SI1 283 aaPredicted RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 ANKRD60Q9BZ19 345 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 CDT1Q9H211 546 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 DHX35Q9H5Z1 703 aaKnown RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 WDR55Q9H6Y2 383 aaPredicted RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 LRRC40Q9H9A6 602 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 ZNF214Q9UL59 606 aaPredicted RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 CDH7Q9ULB5 785 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 AP4E1Q9UPM8 1137 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 SLC8A2Q9UPR5 921 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 TNFSF13BQ9Y275 285 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 AP4S1Q9Y587 144 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 USP3Q9Y6I4 520 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 LCTP09848 1927 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 RLFQ13129 1914 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 IGKV6-21A0A0C4DH24 114 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 A0A1B0GTW7 788 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 TCAF2A6NFQ2 919 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 C9IYK1 514 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 RNF103O00237 685 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 NEMP1O14524 444 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 CFLARO15519 480 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 LTFP02788 710 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 ITGB3P05106 788 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 CHRNGP07510 517 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 IDO1P14902 403 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 PTPN1P18031 435 aaKnown RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 STAT5BP51692 787 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 RHDQ02161 417 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 CBX3Q13185 183 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 TRIM25Q14258 630 aaKnown RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 PTK2BQ14289 1009 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 CYTH1Q15438 398 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 KIZQ2M2Z5 673 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 IL23RQ5VWK5 629 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 EEF1DP3Q658K8 133 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 FSTL4Q6MZW2 842 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 STRA8Q7Z7C7 330 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 FIBCD1Q8N539 461 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP48-206ENST00000464577 URGCPQ8TCY9 931 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 ADAMTS16Q8TE57 1224 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 PGBD4Q96DM1 585 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 HSPBAP1Q96EW2 488 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 VPS50Q96JG6 964 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 MCMBPQ9BTE3 642 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 NT5C1AQ9BXI3 368 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 ACE2Q9BYF1 805 aaPredicted RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 DNAI2Q9GZS0 605 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 COQ10BQ9H8M1 238 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 RRN3Q9NYV6 651 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 GGA3Q9NZ52 723 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 PTBP2Q9UKA9 531 aaKnown RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 SARDHQ9UL12 918 aa7.43□□□□□ -1.22
USP48-206ENST00000464577 COL11A1P12107 1806 aaPredicted RBP7.43□□□□□ -1.22
USP48-206ENST00000464577 TCRBV3S1A0A5B6 114 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TMEM221A6NGB7 291 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PIK3R2O00459 728 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PAPSS1O43252 624 aaPredicted RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 CLASP2O75122 1294 aaKnown RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 FARP2O94887 1054 aaPredicted RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 PIGNO95427 931 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 C2P06681 752 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TFEBP19484 476 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 UBA1P22314 1058 aaKnown RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 SLC7A1P30825 629 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 GMPRP36959 345 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 MLH1P40692 756 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PHKA2P46019 1235 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 GRIA4P48058 902 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 RGS7P49802 495 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PSME3P61289 254 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 IRF9Q00978 393 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PPIL2Q13356 520 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 MAPRE2Q15555 327 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 ZBED5Q49AG3 693 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 ARL13AQ5H913 290 aaPredicted RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 JADE1Q6IE81 842 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 KRT80Q6KB66 452 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TMEM135Q86UB9 458 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 PSTKQ8IV42 348 aaKnown RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 PACRGLQ8N7B6 248 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 ANKFN1Q8N957 763 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 FLAD1Q8NFF5 587 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 DNERQ8NFT8 737 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TMIGD2Q96BF3 282 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 HPDLQ96IR7 371 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 MAELQ96JY0 434 aaKnown RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 ZNF512Q96ME7 567 aaPredicted RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 FCRL3Q96P31 734 aaPredicted RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 TMEM79Q9BSE2 394 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 TEX13BQ9BXU2 312 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 UNC93B1Q9H1C4 597 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 ASB7Q9H672 318 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 CLK4Q9HAZ1 481 aaKnown RBP7.42□□□□□ -1.22
USP48-206ENST00000464577 OLAHQ9NV23 265 aa7.42□□□□□ -1.22
USP48-206ENST00000464577 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms