RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PNRC2Q9NPJ4 139 aaKnown RBP6.47□□□□□ -1.37
PTCD3-205ENST00000464541 ZBTB40Q9NUA8 1239 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 CD207Q9UJ71 328 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 COG5Q9UP83 839 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 DNAJC16Q9Y2G8 782 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 SLC4A4Q9Y6R1 1079 aa6.47□□□□□ -1.37
PTCD3-205ENST00000464541 TRBV5-7A0A0A0MS05 114 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 TCRBV7S3A2A0A539 114 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 MYMKA6NI61 221 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 STX16-NPEPL1H3BU86 382 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 STX16O14662 325 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 TSPAN3O60637 253 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 NDUFB8O95169 186 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 IGKV2-30P06310 120 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 FGF2P09038 288 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 LYL1P12980 280 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 RXRAP19793 462 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 PRKCHP24723 683 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 GJC1P36383 396 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 GAD2Q05329 585 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 LRCH2Q5VUJ6 765 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 COLCA1Q6ZS62 124 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 IRF2BP2Q7Z5L9 587 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 CCDC25Q86WR0 208 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 TMEM217Q8N7C4 229 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 LINS1Q8NG48 757 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 SH3KBP1Q96B97 665 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 MASTLQ96GX5 879 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 RBM17Q96I25 401 aaKnown RBP6.46□□□□□ -1.38
PTCD3-205ENST00000464541 TEFMQ96QE5 360 aaKnown RBP6.46□□□□□ -1.38
PTCD3-205ENST00000464541 IFT27Q9BW83 186 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 RMI1Q9H9A7 625 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 ZNF304Q9HCX3 659 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 ANAPC4Q9UJX5 808 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 SUFUQ9UMX1 484 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 OSGIN2Q9Y236 505 aa6.46□□□□□ -1.38
PTCD3-205ENST00000464541 A0A1W2PPC1 479 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 A6NNC1 897 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 KIF1CO43896 1103 aaKnown RBP6.45□□□□□ -1.38
PTCD3-205ENST00000464541 SYF2O95926 243 aaKnown RBP6.45□□□□□ -1.38
PTCD3-205ENST00000464541 CHRNB1P11230 501 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 PSG1P11464 419 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 TNFRSF1BP20333 461 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 ARHGAP8P85298 464 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 LEXMQ3ZCV2 418 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 ENTPD8Q5MY95 495 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 RNF144BQ7Z419 303 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 DPP10Q8N608 796 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 TMEM174Q8WUU8 243 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 HIPK3Q9H422 1215 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 ZDHHC7Q9NXF8 308 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 FBXO40Q9UH90 709 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 GDAQ9Y2T3 454 aa6.45□□□□□ -1.38
PTCD3-205ENST00000464541 TMEM272A0A1B0GTI8 110 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 OAZ2O95190 189 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 FCGR2AP12318 317 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 KLRC2P26717 231 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 CCT4P50991 539 aaKnown RBP6.44□□□□□ -1.38
PTCD3-205ENST00000464541 TMEM268Q5VZI3 342 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-205ENST00000464541 FAR1Q8WVX9 515 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 LPAR1Q92633 364 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 SLC25A28Q96A46 364 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 ZNF419Q96HQ0 510 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-205ENST00000464541 COG8Q96MW5 612 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 TWNKQ96RR1 684 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 UPB1Q9UBR1 384 aa6.44□□□□□ -1.38
PTCD3-205ENST00000464541 MST1RQ04912 1400 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 FAM90A10PA6NDY2 464 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 STRNO43815 780 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 TMCC1O94876 653 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 TOMM40O96008 361 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 SKIV2L2P42285 1042 aaKnown RBP6.43□□□□□ -1.38
PTCD3-205ENST00000464541 POLD2P49005 469 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 RASSF2P50749 326 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 BIRC3Q13489 604 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 BYSLQ13895 437 aaKnown RBP6.43□□□□□ -1.38
PTCD3-205ENST00000464541 GORABQ5T7V8 394 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 MAP3K21Q5TCX8 1036 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 CAMK1DQ8IU85 385 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 CPXCR1Q8N123 301 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 SCAIQ8N9R8 606 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 BICD2Q8TD16 824 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 NPLQ9BXD5 320 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-205ENST00000464541 ACAD9Q9H845 621 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 MAP6D1Q9H9H5 199 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 LUZP4Q9P127 313 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 DHDHQ9UQ10 334 aa6.43□□□□□ -1.38
PTCD3-205ENST00000464541 VWA3AA6NCI4 1184 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 B4DGG1 531 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 SPTLC2O15270 562 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 RNMTO43148 476 aaKnown RBP6.42□□□□□ -1.38
PTCD3-205ENST00000464541 HBP1O60381 514 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 DDAH2O95865 285 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 MYZAPP0CAP1 466 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 SCP2P22307 547 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 MTNR1AP48039 350 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 PPM1FP49593 454 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-205ENST00000464541 CLCNKBP51801 687 aa6.42□□□□□ -1.38
PTCD3-205ENST00000464541 TBL3Q12788 808 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms