RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GNA12Q03113 381 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 CA9Q16790 459 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 ERMARDQ5T6L9 678 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 PMS2CLQ68D20 193 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 LINGO4Q6UY18 593 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 LPCAT2Q7L5N7 544 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 STK40Q8N2I9 435 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 SLC35G2Q8TBE7 412 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 RFFLQ8WZ73 363 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 PTPRN2Q92932 1015 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 LOXL4Q96JB6 756 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 EPAS1Q99814 870 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 NCAPGQ9BPX3 1015 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 C2orf49Q9BVC5 232 aaPredicted RBP17.45■□□□□ 0.38
VPS52-215ENST00000464425 DHX35Q9H5Z1 703 aaKnown RBP17.45■□□□□ 0.38
VPS52-215ENST00000464425 ITM2CQ9NQX7 267 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 TMEM248Q9NWD8 314 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 CTTNBP2NLQ9P2B4 639 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 VPS51Q9UID3 782 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 ANAPC7Q9UJX3 599 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 AP4E1Q9UPM8 1137 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 NEU3Q9UQ49 428 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 MUC22E2RYF6 1773 aaPredicted RBP17.45■□□□□ 0.38
VPS52-215ENST00000464425 CKAP5Q14008 2032 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 GON4LQ3T8J9 2241 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 A0A0A6YYK5 440 aaPredicted RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 TARSL2A2RTX5 802 aaKnown RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 BTNL10A8MVZ5 291 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 MYO1FO00160 1098 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 CBX4O00257 560 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 PJA2O43164 708 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 LRCH4O75427 683 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 EPN2O95208 641 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 ACVRL1P37023 503 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 VAV2P52735 878 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 HADHBP55084 474 aaKnown RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 CREB5Q02930 508 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 PIGHQ14442 188 aaPredicted RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 DLG2Q15700 870 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 IL31Q6EBC2 164 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 SLC36A4Q6YBV0 504 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 ZNF783Q6ZMS7 281 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 METTL3Q86U44 580 aaKnown RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 FAM124AQ86V42 546 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 NIPA2Q8N8Q9 360 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 ATP11CQ8NB49 1132 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 ACRBPQ8NEB7 543 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 ZNF564Q8TBZ8 553 aaPredicted RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 CALR3Q96L12 384 aaKnown RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 SNRNP25Q9BV90 132 aaKnown RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 RSPH9Q9H1X1 276 aaPredicted RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 FBRSQ9HAH7 460 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 ATP13A1Q9HD20 1204 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 PARD6AQ9NPB6 346 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 USP36Q9P275 1121 aaKnown RBP17.44■□□□□ 0.38
VPS52-215ENST00000464425 IP6K2Q9UHH9 426 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 USP18Q9UMW8 372 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 DOCK4Q8N1I0 1966 aa17.44■□□□□ 0.38
VPS52-215ENST00000464425 THADAQ6YHU6 1953 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 K7ERQ8 282 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 ATP9BO43861 1147 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 BNIP3LO60238 219 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 NDUFS2O75306 463 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 DNTTP04053 509 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 TCF4P15884 667 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 TGM1P22735 817 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 CD6P30203 668 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 ARHGAP25P42331 645 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 PTGER3P43115 390 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 MAPKAPK2P49137 400 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 SEMA3BQ13214 749 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 ZNF776Q68DI1 518 aaPredicted RBP17.43■□□□□ 0.38
VPS52-215ENST00000464425 CYP4V2Q6ZWL3 525 aaPredicted RBP17.43■□□□□ 0.38
VPS52-215ENST00000464425 MMAAQ8IVH4 418 aaKnown RBP17.43■□□□□ 0.38
VPS52-215ENST00000464425 SH2D3CQ8N5H7 860 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 DCAF4L2Q8NA75 395 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 FRS2Q8WU20 508 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 TOE1Q96GM8 510 aaKnown RBP17.43■□□□□ 0.38
VPS52-215ENST00000464425 FAM129BQ96TA1 746 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 ZWILCHQ9H900 591 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 ADGRG1Q9Y653 693 aa17.43■□□□□ 0.38
VPS52-215ENST00000464425 SMAD6O43541 496 aaKnown RBP17.42■□□□□ 0.38
VPS52-215ENST00000464425 RNASEH1O60930 286 aaKnown RBP17.42■□□□□ 0.38
VPS52-215ENST00000464425 SRCP12931 536 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 IL1R2P27930 398 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 PCK1P35558 622 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 VASPP50552 380 aaPredicted RBP17.42■□□□□ 0.38
VPS52-215ENST00000464425 TPI1P60174 286 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 SMTNL2Q2TAL5 461 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 PPP6R3Q5H9R7 873 aaPredicted RBP17.42■□□□□ 0.38
VPS52-215ENST00000464425 KCNT1Q5JUK3 1230 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 Q6ZVU0 165 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 RTL3Q8N8U3 475 aaKnown RBP17.42■□□□□ 0.38
VPS52-215ENST00000464425 GANCQ8TET4 914 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 KCTD15Q96SI1 283 aaPredicted RBP17.42■□□□□ 0.38
VPS52-215ENST00000464425 GPR174Q9BXC1 333 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 SMOC1Q9H4F8 434 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 RETREG1Q9H6L5 497 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 CATSPERBQ9H7T0 1116 aa17.42■□□□□ 0.38
VPS52-215ENST00000464425 OSGEPQ9NPF4 335 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms