RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CFIP05156 583 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 HOXD12P35452 270 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 ZBED6P86452 979 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 SCAPQ12770 1279 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 DUOXA1Q1HG43 343 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 DCAF12L1Q5VU92 463 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 LRSAM1Q6UWE0 723 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 Q6ZVU0 165 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 SLFN11Q7Z7L1 901 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 RNF214Q8ND24 703 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 ISCUQ9H1K1 167 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 NEUROG2Q9H2A3 272 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 TSPY26PQ9H489 355 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 DNAI1Q9UI46 699 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 SLC25A13Q9UJS0 675 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 ACTL7AQ9Y615 435 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 NCOR2Q9Y618 2525 aa13.29□□□□□ -0.28
XRN1-203ENST00000463916 A0A1W2PP55 124 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ILVBLA1L0T0 632 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 TMEM191CA6NGB0 347 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 RNF103O00237 685 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 RNASEH1O60930 286 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 RTN2O75298 545 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ZMPSTE24O75844 475 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ENGP17813 658 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ACVRL1P37023 503 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 PSMD8P48556 350 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ELAVL3Q14576 367 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 SYCP2LQ5T4T6 812 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ERMP1Q7Z2K6 904 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ATP11CQ8NB49 1132 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 C1orf216Q8TAB5 229 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 SYN2Q92777 582 aaPredicted RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 SPON2Q9BUD6 331 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 C2orf49Q9BVC5 232 aaPredicted RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 BTBD1Q9H0C5 482 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 EIF2B4Q9UI10 523 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 CNOT1A5YKK6 2376 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 NYNRINQ9P2P1 1898 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 MED19A0JLT2 244 aaPredicted RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 ANKRD62A6NC57 917 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 MEI4A8MW99 385 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 CBX4O00257 560 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 PLK4O00444 970 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ZNF821O75541 412 aaPredicted RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 RNASEH2AO75792 299 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 SEMA4FO95754 770 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 IL1BP01584 269 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 SERPINF2P08697 491 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 RHOQP17081 205 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 CASP14P31944 242 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 MAPK8P45983 427 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 KRT83P78385 493 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 GNA12Q03113 381 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 TTC31Q49AM3 519 aaPredicted RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 TDRD12Q587J7 1177 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 USP30Q70CQ3 517 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 DCAF4L2Q8NA75 395 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 OR2I1PQ8NGU4 316 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 GANCQ8TET4 914 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 BIRC7Q96CA5 298 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 NUSAP1Q9BXS6 441 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 MIR1-1HGQ9H1L0 117 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 CNOT8Q9UFF9 292 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 FZD10Q9ULW2 581 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 SLC6A14Q9UN76 642 aa13.28□□□□□ -0.28
XRN1-203ENST00000463916 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 LUC7L2Q9Y383 392 aaKnown RBP13.28□□□□□ -0.28
XRN1-203ENST00000463916 PCDH15Q96QU1 1955 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 A0A087X0T9 212 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 BNIP3LO60238 219 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 CD160O95971 181 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 FAM228BP0C875 321 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 DRD3P35462 400 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 ARF5P84085 180 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 POM121L1PQ3SYA9 428 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 WDR45BQ5MNZ6 344 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 PPP1R2P3Q6NXS1 205 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 ZNF783Q6ZMS7 281 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 HDDC3Q8N4P3 179 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 ZCCHC9Q8N567 271 aaKnown RBP13.27□□□□□ -0.28
XRN1-203ENST00000463916 OR2A12Q8NGT7 310 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 CEP76Q8TAP6 659 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 ZNF653Q96CK0 615 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 PEBP4Q96S96 227 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.27□□□□□ -0.28
XRN1-203ENST00000463916 ATP13A1Q9HD20 1204 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 TMEM248Q9NWD8 314 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 ARHGAP20Q9P2F6 1191 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 MYO1AQ9UBC5 1043 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 PPM1HQ9ULR3 514 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 SCML1Q9UN30 329 aa13.27□□□□□ -0.28
XRN1-203ENST00000463916 FAM47DPA6NHR8 397 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 MCF2LO15068 1137 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 SERPING1P05155 500 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 IGHV4-34P06331 123 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 CTSLP07711 333 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 PSMA2P25787 234 aa13.27□□□□□ -0.29
XRN1-203ENST00000463916 L1CAMP32004 1257 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms