RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 Q6ZVU0 165 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 ZNF677Q86XU0 584 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 BAHD1Q8TBE0 780 aaPredicted RBP19.35■□□□□ 0.69
SF3A1-205ENST00000463818 SLC20A1Q8WUM9 679 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 SKA1Q96BD8 255 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 PSMB7Q99436 277 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 CDC6Q99741 560 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 AASDHPPTQ9NRN7 309 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 FANCLQ9NW38 375 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 MPP6Q9NZW5 540 aa19.35■□□□□ 0.69
SF3A1-205ENST00000463818 NOCTQ9UK39 431 aaKnown RBP19.35■□□□□ 0.69
SF3A1-205ENST00000463818 TMEM8BA6NDV4 472 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 E9PAM4 449 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 MCF2LO15068 1137 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 BNIP3LO60238 219 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 SNAP91O60641 907 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 SRGAP2O75044 1071 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 RTN2O75298 545 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 TPM2P07951 284 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 CHRNB2P17787 502 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 CD38P28907 300 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 CCT8P50990 548 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 POM121L1PQ3SYA9 428 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 FKBP15Q5T1M5 1219 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 ACBD5Q5T8D3 534 aaPredicted RBP19.34■□□□□ 0.69
SF3A1-205ENST00000463818 RBM43Q6ZSC3 357 aaKnown RBP19.34■□□□□ 0.69
SF3A1-205ENST00000463818 PHLDB2Q86SQ0 1253 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 SETD3Q86TU7 594 aaPredicted RBP19.34■□□□□ 0.69
SF3A1-205ENST00000463818 PIP4K2CQ8TBX8 421 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 FAM131CQ96AQ9 280 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 CFAP57Q96MR6 1250 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 HAPLN3Q96S86 360 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 NLRC4Q9NPP4 1024 aa19.34■□□□□ 0.69
SF3A1-205ENST00000463818 FAM207AQ9NSI2 230 aaPredicted RBP19.34■□□□□ 0.69
SF3A1-205ENST00000463818 TPX2Q9ULW0 747 aaKnown RBP19.34■□□□□ 0.69
SF3A1-205ENST00000463818 CABIN1Q9Y6J0 2220 aa19.33■□□□□ 0.69
SF3A1-205ENST00000463818 A0A0D9SEW6 157 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 A0A1W2PR77 199 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 EPHB6O15197 1021 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 PCDHGA12O60330 932 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 DFNA5O60443 496 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 CYP1A1P04798 512 aaPredicted RBP19.33■□□□□ 0.68
SF3A1-205ENST00000463818 ATXN1LP0C7T5 689 aaKnown RBP19.33■□□□□ 0.68
SF3A1-205ENST00000463818 SRCP12931 536 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 SOX5P35711 763 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 PPP2CBP62714 309 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 PPP2CAP67775 309 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 IL9RQ01113 521 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 CDR2Q01850 454 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 CNTN1Q12860 1018 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 ARTNQ5T4W7 220 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 ARCQ7LC44 396 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 BNIPLQ7Z465 357 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 TFAP2DQ7Z6R9 452 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 FAM131BQ86XD5 332 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 ATP11CQ8NB49 1132 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 SERAC1Q96JX3 654 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 C2orf49Q9BVC5 232 aaPredicted RBP19.33■□□□□ 0.68
SF3A1-205ENST00000463818 KDM4CQ9H3R0 1056 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 VPS51Q9UID3 782 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 HS3ST2Q9Y278 367 aa19.33■□□□□ 0.68
SF3A1-205ENST00000463818 IGLV3-10A0A075B6K4 115 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 A0A1B0GTQ1 180 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 C1QTNF3-AMACRE9PGA6 284 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 K7ERQ8 282 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 ALOX15BO15296 676 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 SLC7A4O43246 635 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 SMAD6O43541 496 aaKnown RBP19.32■□□□□ 0.68
SF3A1-205ENST00000463818 ENDOD1O94919 500 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 OR1E1P30953 314 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 COPB1P53618 953 aaKnown RBP19.32■□□□□ 0.68
SF3A1-205ENST00000463818 JAM2P57087 298 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 ATP11AP98196 1134 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 FMO1Q01740 532 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 C6orf118Q5T5N4 469 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 SASS6Q6UVJ0 657 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 PRPF39Q86UA1 669 aaKnown RBP19.32■□□□□ 0.68
SF3A1-205ENST00000463818 EMC1Q8N766 993 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 SLC30A5Q8TAD4 765 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 ELF4Q99607 663 aaPredicted RBP19.32■□□□□ 0.68
SF3A1-205ENST00000463818 METTL5Q9NRN9 209 aaKnown RBP19.32■□□□□ 0.68
SF3A1-205ENST00000463818 TOR4AQ9NXH8 423 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 ARHGAP20Q9P2F6 1191 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 SIK3Q9Y2K2 1263 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 FARP1Q9Y4F1 1045 aaPredicted RBP19.32■□□□□ 0.68
SF3A1-205ENST00000463818 FRYQ5TBA9 3013 aa19.32■□□□□ 0.68
SF3A1-205ENST00000463818 GOLGA8CPA6NN73 597 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 TLR4O00206 839 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 LATO43561 262 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 PLRG1O43660 514 aaKnown RBP19.31■□□□□ 0.68
SF3A1-205ENST00000463818 MMP8P22894 467 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 RRM1P23921 792 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 MAT2AP31153 395 aaKnown RBP19.31■□□□□ 0.68
SF3A1-205ENST00000463818 STAT1P42224 750 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 GRK6P43250 576 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 RAB6CQ53S08 254 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 AGBL4Q5VU57 503 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 LINGO4Q6UY18 593 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 DCAF4L2Q8NA75 395 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 OR7D4Q8NG98 312 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms