RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 RNF139Q8WU17 664 aa18.8■□□□□ 0.6
HPS3-204ENST00000462030 SREK1Q8WXA9 508 aaKnown RBP18.8■□□□□ 0.6
HPS3-204ENST00000462030 ACE2Q9BYF1 805 aaPredicted RBP18.8■□□□□ 0.6
HPS3-204ENST00000462030 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.8■□□□□ 0.6
HPS3-204ENST00000462030 ZDHHC2Q9UIJ5 367 aa18.8■□□□□ 0.6
HPS3-204ENST00000462030 VANGL2Q9ULK5 521 aa18.8■□□□□ 0.6
HPS3-204ENST00000462030 GOLGA8TH3BQL2 631 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 HBP1O60381 514 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 SBK3P0C264 359 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 ME2P23368 584 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 GMPSP49915 693 aaPredicted RBP18.79■□□□□ 0.6
HPS3-204ENST00000462030 PDK1Q15118 436 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 NXNQ6DKJ4 435 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
HPS3-204ENST00000462030 SLC7A14Q8TBB6 771 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 DRC3Q9H069 523 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 IGSF9Q9P2J2 1179 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 RNASEH2AO75792 299 aaKnown RBP18.79■□□□□ 0.6
HPS3-204ENST00000462030 FAM200BP0CF97 657 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 TFEBP19484 476 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 GLRBP48167 497 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 SULT1E1P49888 294 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 USP41Q3LFD5 358 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 TMEM135Q86UB9 458 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 CPSF7Q8N684 471 aaKnown RBP18.79■□□□□ 0.6
HPS3-204ENST00000462030 TMEM102Q8N9M5 508 aaPredicted RBP18.79■□□□□ 0.6
HPS3-204ENST00000462030 PDCD6IPQ8WUM4 868 aaKnown RBP18.79■□□□□ 0.6
HPS3-204ENST00000462030 KLRG1Q96E93 195 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 TASP1Q9H6P5 420 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 RNF19AQ9NV58 838 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 KLHL8Q9P2G9 620 aaPredicted RBP18.79■□□□□ 0.6
HPS3-204ENST00000462030 AKT3Q9Y243 479 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 ZSWIM8A7E2V4 1837 aa18.79■□□□□ 0.6
HPS3-204ENST00000462030 H2AFYO75367 372 aaKnown RBP18.78■□□□□ 0.6
HPS3-204ENST00000462030 BCAS2O75934 225 aaPredicted RBP18.78■□□□□ 0.6
HPS3-204ENST00000462030 SAT1P21673 171 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 SLC5A2P31639 672 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 SNX16P57768 344 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 NSUN2Q08J23 767 aaKnown RBP eCLIP18.78■□□□□ 0.6
HPS3-204ENST00000462030 MPP3Q13368 585 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 CERCAMQ5T4B2 595 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 STRADAQ7RTN6 431 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 DEFB106AQ8N104 65 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 TMEM151AQ8N4L1 468 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 DNAAF3Q8N9W5 541 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 TMA16Q96EY4 203 aaKnown RBP18.78■□□□□ 0.6
HPS3-204ENST00000462030 VPS39Q96JC1 886 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 NPAS2Q99743 824 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 SMARCAD1Q9H4L7 1026 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 PRDM16Q9HAZ2 1276 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 SLC39A10Q9ULF5 831 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 ACOT8O14734 319 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 PDGFRBP09619 1106 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 PTPN1P18031 435 aaKnown RBP18.78■□□□□ 0.6
HPS3-204ENST00000462030 NAGLUP54802 743 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 BST2Q10589 180 aaKnown RBP18.78■□□□□ 0.6
HPS3-204ENST00000462030 OTUD1Q5VV17 481 aaPredicted RBP18.78■□□□□ 0.6
HPS3-204ENST00000462030 LIPMQ5VYY2 423 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 ZYG11AQ6WRX3 759 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 APOL2Q9BQE5 337 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 SLC2A11Q9BYW1 496 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 FAM124BQ9H5Z6 455 aaPredicted RBP18.78■□□□□ 0.6
HPS3-204ENST00000462030 IARS2Q9NSE4 1012 aaKnown RBP18.78■□□□□ 0.6
HPS3-204ENST00000462030 PLXNA1Q9UIW2 1896 aa18.78■□□□□ 0.6
HPS3-204ENST00000462030 H3BSA7 217 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 PHGDHO43175 533 aaKnown RBP18.77■□□□□ 0.6
HPS3-204ENST00000462030 VAPBO95292 243 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 CDK4P11802 303 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 INSRRP14616 1297 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 ART3Q13508 389 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 ZNF410Q86VK4 478 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 KCNMB4Q86W47 210 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 ZMAT2Q96NC0 199 aaKnown RBP18.77■□□□□ 0.6
HPS3-204ENST00000462030 SPATC1LQ9H0A9 340 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 ZBTB26Q9HCK0 441 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 RCOR3Q9P2K3 495 aaPredicted RBP18.77■□□□□ 0.6
HPS3-204ENST00000462030 TUBGCP4Q9UGJ1 667 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 CDYLQ9Y232 598 aa18.77■□□□□ 0.6
HPS3-204ENST00000462030 CCDC78A2IDD5 438 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 AP2A1O95782 977 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 CAPNS1P04632 268 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 GRM3Q14832 879 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 NRF1Q16656 503 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 ARHGAP17Q68EM7 881 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 PTAR1Q7Z6K3 402 aaPredicted RBP18.77■□□□□ 0.59
HPS3-204ENST00000462030 SETD3Q86TU7 594 aaPredicted RBP18.77■□□□□ 0.59
HPS3-204ENST00000462030 PSTKQ8IV42 348 aaKnown RBP18.77■□□□□ 0.59
HPS3-204ENST00000462030 ZSCAN18Q8TBC5 510 aaPredicted RBP18.77■□□□□ 0.59
HPS3-204ENST00000462030 DLG3Q92796 817 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 FAM149B1Q96BN6 582 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 C1QTNF1Q9BXJ1 281 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 C20orf96Q9NUD7 363 aaPredicted RBP18.77■□□□□ 0.59
HPS3-204ENST00000462030 BFARQ9NZS9 450 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 BCAP29Q9UHQ4 241 aa18.77■□□□□ 0.59
HPS3-204ENST00000462030 BTBD19C9JJ37 291 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 IRF6O14896 467 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 TSPAN1O60635 241 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 PTPN3P26045 913 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 AVPR1AP37288 418 aa18.76■□□□□ 0.59
HPS3-204ENST00000462030 MATKP42679 507 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms