RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SNRNP27Q8WVK2 155 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 ELP4Q96EB1 424 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 RNFT2Q96EX2 444 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 CLMNQ96JQ2 1002 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TEFMQ96QE5 360 aaKnown RBP3.3□□□□□ -1.88
HDAC6-212ENST00000461608 FCRL5Q96RD9 977 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 MROH8Q9H579 483 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 CPNE5Q9HCH3 593 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TXNRD2Q9NNW7 524 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 KCND2Q9NZV8 630 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 KLQ9UEF7 1012 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 DHDHQ9UQ10 334 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 TNFSF13BQ9Y275 285 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 DTX4Q9Y2E6 619 aa3.3□□□□□ -1.88
HDAC6-212ENST00000461608 LMTK3Q96Q04 1460 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 PI4KAP2A4QPH2 592 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 SPTLC2O15270 562 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 KAT7O95251 611 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 LDHCP07864 332 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 ACADMP11310 421 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 CDH2P19022 906 aaPredicted RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 RPS6KB1P23443 525 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 EPHA8P29322 1005 aaPredicted RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 CHRNA5P30532 468 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 ABCD1P33897 745 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 ARL3P36405 182 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 SKIV2L2P42285 1042 aaKnown RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 RARSP54136 660 aaKnown RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 CDH15P55291 814 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 KRTAP10-11P60412 298 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 RPL7AP62424 266 aaKnown RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 RHAGQ02094 409 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 SEMA3AQ14563 771 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 NAA25Q14CX7 972 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 C5orf22Q49AR2 442 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 MTFR2Q6P444 385 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 DHRS13Q6UX07 377 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 ZNF813Q6ZN06 617 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 RBM44Q6ZP01 1051 aaKnown RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 H1FNTQ75WM6 255 aaPredicted RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 RTL10Q7L3V2 364 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 R3HCC1LQ7Z5L2 792 aaKnown RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 NEK8Q86SG6 692 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 VPS52Q8N1B4 723 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 C11orf65Q8NCR3 313 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 ZNF398Q8TD17 642 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 CNOT9Q92600 299 aaKnown RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 PIGKQ92643 395 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 ASB2Q96Q27 587 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 EYA3Q99504 573 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 MACROD1Q9BQ69 325 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 HDHD5Q9BXW7 423 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 CTDSP1Q9GZU7 261 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 DIAPH3Q9NSV4 1193 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 SEMA4GQ9NTN9 838 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 BLOC1S4Q9NUP1 217 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 TMEM248Q9NWD8 314 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 ARL15Q9NXU5 204 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 TBC1D14Q9P2M4 693 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 UPB1Q9UBR1 384 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 IPO11Q9UI26 975 aaKnown RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 SARDHQ9UL12 918 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 CNPY2Q9Y2B0 182 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 RABGAP1Q9Y3P9 1069 aa3.29□□□□□ -1.88
HDAC6-212ENST00000461608 ARHGEF17Q96PE2 2063 aaPredicted RBP3.29□□□□□ -1.88
HDAC6-212ENST00000461608 SALL3Q9BXA9 1300 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 KDM3AQ9Y4C1 1321 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 OR6C68A6NDL8 312 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 LINC01548A6NM66 108 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 MGST3O14880 152 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 PER2O15055 1255 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 INPPL1O15357 1258 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 USO1O60763 962 aaKnown RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 EIF5BO60841 1220 aaKnown RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 RNASEH2AO75792 299 aaKnown RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 SEC14L2O76054 403 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 CD63P08962 238 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 COX7A2P14406 83 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 TYK2P29597 1187 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 SOX2P48431 317 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 POLD2P49005 469 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 ELLP55199 621 aaPredicted RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 C21orf58P58505 322 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 KRTAP10-9P60411 292 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 TUBA4AP68366 448 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 EFNB1P98172 346 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 SLC10A2Q12908 348 aaPredicted RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 EIF4A2Q14240 407 aaKnown RBP3.28□□□□□ -1.88
HDAC6-212ENST00000461608 ERV3-1Q14264 604 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 GALNT3Q14435 633 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 IL13RA2Q14627 380 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 FAM69AQ5T7M9 428 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 PRAMEF17Q5VTA0 474 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 FAM171A1Q5VUB5 890 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 CCDC30Q5VVM6 783 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 FCRLBQ6BAA4 426 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 ITPRIPL1Q6GPH6 555 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 SLC30A9Q6PML9 568 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 SLC22A25Q6T423 547 aa3.28□□□□□ -1.88
HDAC6-212ENST00000461608 ATF7IPQ6VMQ6 1270 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms