RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 HEATR6Q6AI08 1181 aaKnown RBP23■■□□□ 1.27
C9orf3-209ENST00000460573 PKN3Q6P5Z2 889 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 ARHGEF2Q92974 986 aaKnown RBP23■■□□□ 1.27
C9orf3-209ENST00000460573 ATP13A1Q9HD20 1204 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 SLC25A13Q9UJS0 675 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 AMFRQ9UKV5 643 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 HPCAL4Q9UM19 191 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 SLC8A2Q9UPR5 921 aa23■■□□□ 1.27
C9orf3-209ENST00000460573 CCDC66A2RUB6 948 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 LRRD1A4D1F6 860 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 ZSCAN12O43309 604 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 TNNT1P13805 278 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 CTNNA1P35221 906 aaKnown RBP22.99■■□□□ 1.27
C9orf3-209ENST00000460573 SLC20A2Q08357 652 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 FNDC3BQ53EP0 1204 aaKnown RBP22.99■■□□□ 1.27
C9orf3-209ENST00000460573 ANKRD20A8PQ5CZ79 823 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 TMCO3Q6UWJ1 677 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 PEX26Q7Z412 305 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 KATNAL2Q8IYT4 538 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 DCLK2Q8N568 766 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 CCDC33Q8N5R6 958 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 SUMF1Q8NBK3 374 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 OR7D4Q8NG98 312 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 CYB5D2Q8WUJ1 264 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 SORCS1Q8WY21 1168 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 RAPGEF5Q92565 580 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 FAF2Q96CS3 445 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 PSMB7Q99436 277 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 SPON2Q9BUD6 331 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 ACE2Q9BYF1 805 aaPredicted RBP22.99■■□□□ 1.27
C9orf3-209ENST00000460573 EPC1Q9H2F5 836 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 LZTFL1Q9NQ48 299 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 STON1Q9Y6Q2 735 aa22.99■■□□□ 1.27
C9orf3-209ENST00000460573 VPS13AQ96RL7 3174 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 ANTXRLA6NF34 631 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 MIF4GDA9UHW6 222 aaKnown RBP22.98■■□□□ 1.27
C9orf3-209ENST00000460573 SGK1O00141 431 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 DCLK1O15075 740 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 KRT1P04264 644 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 CD48P09326 243 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 AMPD1P23109 780 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 CTNNA2P26232 953 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 SERPINB6P35237 376 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 IL12RB1P42701 662 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 DGKEP52429 567 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 CRY1Q16526 586 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 IL31Q6EBC2 164 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 RETSATQ6NUM9 610 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 SERPINA13PQ6UXR4 307 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 NT5DC3Q86UY8 548 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 RCOR2Q8IZ40 523 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 CAMKK1Q8N5S9 505 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 ACOX2Q99424 681 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 TMEM245Q9H330 911 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 NOL6Q9H6R4 1146 aaKnown RBP22.98■■□□□ 1.27
C9orf3-209ENST00000460573 KLHL11Q9NVR0 708 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 CACNA2D2Q9NY47 1150 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 SUN2Q9UH99 717 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 PCDHA3Q9Y5H8 950 aa22.98■■□□□ 1.27
C9orf3-209ENST00000460573 RASA4BC9J798 803 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 RASA4O43374 803 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 LILRB5O75023 590 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 ADAM23O75077 832 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 ZRANB2O95218 330 aaKnown RBP eCLIP22.97■■□□□ 1.27
C9orf3-209ENST00000460573 FNTBP49356 437 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 GEMIN4P57678 1058 aaKnown RBP22.97■■□□□ 1.27
C9orf3-209ENST00000460573 STARD3Q14849 445 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 LPAL2Q16609 132 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 AFMIDQ63HM1 303 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 CEP68Q76N32 757 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 GPR161Q8N6U8 529 aaKnown RBP22.97■■□□□ 1.27
C9orf3-209ENST00000460573 RBM41Q96IZ5 413 aaKnown RBP22.97■■□□□ 1.27
C9orf3-209ENST00000460573 MRGPRX3Q96LB0 322 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 ALS2CR12Q96Q35 445 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 MAK16Q9BXY0 300 aaKnown RBP22.97■■□□□ 1.27
C9orf3-209ENST00000460573 KLC2Q9H0B6 622 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 LRRC19Q9H756 370 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 POLMQ9NP87 494 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-209ENST00000460573 VPS51Q9UID3 782 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 CAPN6Q9Y6Q1 641 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 ATG2BQ96BY7 2078 aa22.97■■□□□ 1.27
C9orf3-209ENST00000460573 ZSCAN5CA6NGD5 496 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-209ENST00000460573 ARHGAP42A6NI28 874 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 C3orf70A6NLC5 250 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-209ENST00000460573 CBX4O00257 560 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 KDELR3O43731 214 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 HOXB2P14652 356 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 HOXA6P31267 233 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 CTSOP43234 321 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-209ENST00000460573 MMRN1Q13201 1228 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 SIM2Q14190 667 aaPredicted RBP22.96■■□□□ 1.27
C9orf3-209ENST00000460573 UBL4BQ8N7F7 174 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 EXD1Q8NHP7 514 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 PCDH19Q8TAB3 1148 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 NELL1Q92832 810 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 MYO19Q96H55 970 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 RNF157Q96PX1 679 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 ZDHHC4Q9NPG8 344 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 HS3ST2Q9Y278 367 aa22.96■■□□□ 1.27
C9orf3-209ENST00000460573 EP300Q09472 2414 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms