RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 A0A1W2PP55 124 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 ALOX15BO15296 676 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 KCNK5O95279 499 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 IL1BP01584 269 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 ADRB1P08588 477 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 GOT1P17174 413 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 CSRP1P21291 193 aaKnown RBP16.52■□□□□ 0.24
COL7A1-203ENST00000459756 KCNA4P22459 653 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 PRKCIP41743 596 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 ZNF143P52747 638 aaPredicted RBP16.52■□□□□ 0.24
COL7A1-203ENST00000459756 FIGNQ5HY92 759 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 PPP1R15BQ5SWA1 713 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 MANEALQ5VSG8 457 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 HDDC3Q8N4P3 179 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 MINDY1Q8N5J2 469 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 C1orf216Q8TAB5 229 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 OR8D1Q8WZ84 308 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 BIRC7Q96CA5 298 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 MCEEQ96PE7 176 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 CNPY3Q9BT09 278 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 TTYH3Q9C0H2 523 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 HAUS4Q9H6D7 363 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 SERGEFQ9UGK8 458 aa16.52■□□□□ 0.24
COL7A1-203ENST00000459756 A0A0D9SEW6 157 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 LRRC72A6NJI9 287 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 UPK3BL1B0FP48 263 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 UPK3BL2E5RIL1 263 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 MCF2LO15068 1137 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 SNAP91O60641 907 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 OPHN1O60890 802 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 FSBPO95073 299 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 PLEKP08567 350 aaPredicted RBP16.51■□□□□ 0.23
COL7A1-203ENST00000459756 SRCP12931 536 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 DESP17661 470 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 RRM1P23921 792 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 CD27P26842 260 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 NOVA1P51513 510 aaKnown RBP16.51■□□□□ 0.23
COL7A1-203ENST00000459756 CLCN6P51797 869 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 AFF3P51826 1226 aaKnown RBP16.51■□□□□ 0.23
COL7A1-203ENST00000459756 RPL7AP62424 266 aaKnown RBP16.51■□□□□ 0.23
COL7A1-203ENST00000459756 FANCCQ00597 558 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 SCAPQ12770 1279 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 GRIK2Q13002 908 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 FAM46CQ5VWP2 391 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 KIAA0895LQ68EN5 471 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 DCUN1D2Q6PH85 259 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 Q6ZVU0 165 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 AADATQ8N5Z0 425 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 CCDC185Q8N715 623 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 ATP11CQ8NB49 1132 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 OR2T34Q8NGX1 318 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 CCDC114Q96M63 670 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 NEUROG2Q9H2A3 272 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 OSGEPQ9NPF4 335 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 DNAAF2Q9NVR5 837 aaKnown RBP16.51■□□□□ 0.23
COL7A1-203ENST00000459756 TAS2R14Q9NYV8 317 aa16.51■□□□□ 0.23
COL7A1-203ENST00000459756 ASCC3Q8N3C0 2202 aaKnown RBP16.51■□□□□ 0.23
COL7A1-203ENST00000459756 CCP110O43303 1012 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 MT-CO1P00395 513 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 GZMAP12544 262 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 CEACAM1P13688 526 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 RHOQP17081 205 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 ETFBP38117 255 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 MAPKAPK2P49137 400 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 GALCP54803 685 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 AIF1P55008 147 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 UBASH3AP57075 661 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 GNA12Q03113 381 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 SLC20A2Q08357 652 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 KLHL30Q0D2K2 578 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 SEMA3BQ13214 749 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 E4F1Q66K89 784 aaPredicted RBP16.5■□□□□ 0.23
COL7A1-203ENST00000459756 PSAPL1Q6NUJ1 521 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 RETSATQ6NUM9 610 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 RWDD4Q6NW29 188 aaKnown RBP16.5■□□□□ 0.23
COL7A1-203ENST00000459756 NCEH1Q6PIU2 408 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
COL7A1-203ENST00000459756 SLFN11Q7Z7L1 901 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 DRC7Q8IY82 874 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 OR7D4Q8NG98 312 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 TBC1D31Q96DN5 1066 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 SPON2Q9BUD6 331 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 ATP13A1Q9HD20 1204 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 PARVAQ9NVD7 372 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 PPM1HQ9ULR3 514 aa16.5■□□□□ 0.23
COL7A1-203ENST00000459756 FARP1Q9Y4F1 1045 aaPredicted RBP16.5■□□□□ 0.23
COL7A1-203ENST00000459756 CXorf51AA0A1B0GTR3 108 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 A0A1W2PQJ5 194 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 FAM47DPA6NHR8 397 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 TMCO5BA8MYB1 307 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 C1QTNF3-AMACRE9PGA6 284 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 FAM72CH0Y354 149 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 CBX4O00257 560 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 SLC7A4O43246 635 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 LRIG2O94898 1065 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 IGHV4-34P06331 123 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 L1CAMP32004 1257 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 PBX1P40424 430 aa16.49■□□□□ 0.23
COL7A1-203ENST00000459756 ADPRHP54922 357 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms