RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 PRICKLE1Q96MT3 831 aaPredicted RBP11.65□□□□□ -0.54
PRAMEF35P-201ENST00000458709 FAM129BQ96TA1 746 aa11.65□□□□□ -0.54
PRAMEF35P-201ENST00000458709 NIF3L1Q9GZT8 377 aa11.65□□□□□ -0.54
PRAMEF35P-201ENST00000458709 RBSNQ9H1K0 784 aa11.65□□□□□ -0.54
PRAMEF35P-201ENST00000458709 OLA1Q9NTK5 396 aaKnown RBP11.65□□□□□ -0.54
PRAMEF35P-201ENST00000458709 RAB20Q9NX57 234 aa11.65□□□□□ -0.54
PRAMEF35P-201ENST00000458709 EDDM13A0A1B0GTR0 161 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 PMS2P1A4D2B8 440 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 RTN2O75298 545 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ASLP04424 464 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 GIMD1P0DJR0 217 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 CKMT1AP12532 417 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 C5AR1P21730 350 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 DGKAP23743 735 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 MZF1P28698 734 aaPredicted RBP11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 NFKB2Q00653 900 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ARID5BQ14865 1188 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 POM121L1PQ3SYA9 428 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 COLEC12Q5KU26 742 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 C6orf132Q5T0Z8 1188 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 MPP7Q5T2T1 576 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 TRIM65Q6PJ69 517 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 IQCHQ86VS3 1027 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 TTC39CQ8N584 583 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 EXD3Q8N9H8 876 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 RNF139Q8WU17 664 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 IQCDQ96DY2 449 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 IMPG2Q9BZV3 1241 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 OSBPL2Q9H1P3 480 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 CYTH4Q9UIA0 394 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 SLCO3A1Q9UIG8 710 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 SATB2Q9UPW6 733 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 CNTN6Q9UQ52 1028 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ERVW-1Q9UQF0 538 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 SIK3Q9Y2K2 1263 aa11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 HEMK1Q9Y5R4 338 aaPredicted RBP11.64□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ITIH6Q6UXX5 1313 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 LY6G6EA0A0G2JKS1 128 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 TARSL2A2RTX5 802 aaKnown RBP11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 YJEFN3A6XGL0 299 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 E7ENQ6 273 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 MAGEC1O60732 1142 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ADH1BP00325 375 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 IL1BP01584 269 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 VAV1P15498 845 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 MTIF2P46199 727 aaKnown RBP11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 NUMBP49757 651 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 RPS24P62847 133 aaKnown RBP11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 SKOR1P84550 965 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 FANCCQ00597 558 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ADIGQ0VDE8 80 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 OVGP1Q12889 678 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 STAT4Q14765 748 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 DCAF17Q5H9S7 520 aaPredicted RBP11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 FSCBQ5H9T9 825 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 PITRM1Q5JRX3 1037 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 BSPRYQ5W0U4 402 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 NADSYN1Q6IA69 706 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ENOSF1Q7L5Y1 443 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 PRPF39Q86UA1 669 aaKnown RBP11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 CARNMT1Q8N4J0 409 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 KDM1BQ8NB78 822 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 SLC4A11Q8NBS3 891 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 FIBINQ8TAL6 211 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 SEMA4DQ92854 862 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 PTPRN2Q92932 1015 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 RPL10LQ96L21 214 aaKnown RBP11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 APOLD1Q96LR9 279 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 MYOCQ99972 504 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 UBXN6Q9BZV1 441 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 U3KQA8 63 aa11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 NYNRINQ9P2P1 1898 aaKnown RBP11.63□□□□□ -0.55
PRAMEF35P-201ENST00000458709 PIEZO2Q9H5I5 2752 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 PLRG1O43660 514 aaKnown RBP11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ACSL4O60488 711 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 IGLV3-27P01718 113 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 TPM2P07951 284 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 PON1P27169 355 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 STK19P49842 368 aaPredicted RBP11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 RAD23BP54727 409 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 KCNMA1Q12791 1236 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 CDH18Q13634 790 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ELAVL3Q14576 367 aaKnown RBP11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 EXOC3L4Q17RC7 722 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ISXQ2M1V0 245 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 GOLGA7BQ2TAP0 167 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 HS1BP3Q53T59 392 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ARHGAP17Q68EM7 881 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 IGF2-ASQ6U949 168 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 GBP6Q6ZN66 633 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 CCDC81Q6ZN84 652 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 UBR7Q8N806 425 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ZNF557Q8N988 423 aaPredicted RBP11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 ANKRD52Q8NB46 1076 aa11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 HJURPQ8NCD3 748 aaPredicted RBP11.62□□□□□ -0.55
PRAMEF35P-201ENST00000458709 EHBP1Q8NDI1 1231 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms