RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 DKK1O94907 266 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 RHOCP08134 193 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 PLA2G2AP14555 144 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 UCHL3P15374 230 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 GOT1P17174 413 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 EEF1GP26641 437 aaKnown RBP16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 CDH4P55283 916 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 RACK1P63244 317 aaKnown RBP16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 SEMG2Q02383 582 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 KCNMA1Q12791 1236 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 TCP11X2Q5H9J9 407 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 BRMS1LQ5PSV4 323 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 LRRC31Q6UY01 552 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 C14orf80Q86SX3 495 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 AADATQ8N5Z0 425 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 PDCD7Q8N8D1 485 aaKnown RBP16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 FAM129BQ96TA1 746 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 FTSJ1Q9UET6 329 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 ADAMTS1Q9UHI8 967 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 PCDHGB2Q9Y5G2 931 aa16.18■□□□□ 0.18
CHCHD3-204ENST00000457942 ZNF462Q96JM2 2506 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 CABIN1Q9Y6J0 2220 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3DA0A087WVF3 549 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3IA0A087WXS9 549 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3EA0A087X179 549 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3KA0A087X1G2 549 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3FA6NER0 549 aaPredicted RBP16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3LB9A6J9 549 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 C1QTNF3-AMACRE9PGA6 284 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 H0Y8X5 98 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TNFSF14O43557 240 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 ADCY5O95622 1261 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3HP0C7X1 549 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 GRK6P43250 576 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 PLK1P53350 603 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 ADPRHP54922 357 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 INAVAQ3KP66 663 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 POM121L1PQ3SYA9 428 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 C2CD6Q53TS8 623 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 KCNT1Q5JUK3 1230 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 OTUD1Q5VV17 481 aaPredicted RBP16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 FAM46CQ5VWP2 391 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3GQ6DHY5 549 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3CQ6IPX1 549 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 Q6ZVU0 165 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBC1D3Q8IZP1 549 aaPredicted RBP16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 FCRL3Q96P31 734 aaPredicted RBP16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 TBCBQ99426 244 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 NPY6RQ99463 290 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 FEM1AQ9BSK4 669 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 VPS16Q9H269 839 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 RAI2Q9Y5P3 530 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 SNX10Q9Y5X0 201 aa16.17■□□□□ 0.18
CHCHD3-204ENST00000457942 CYSRT1A8MQ03 144 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 F8VZ95 297 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 TLX3O43711 291 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 LSM8O95777 96 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 F9P00740 461 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 TFE3P19532 575 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 CDH5P33151 784 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 CTSKP43235 329 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 KRT83P78385 493 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 DLG2Q15700 870 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 SMAD1Q15797 465 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 SLC45A4Q5BKX6 768 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 CT47A1Q5JQC4 288 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 FKBP15Q5T1M5 1219 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 NAA35Q5VZE5 725 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 TFAP2DQ7Z6R9 452 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 NOP9Q86U38 636 aaKnown RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 XYLT1Q86Y38 959 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 GATAD2AQ86YP4 633 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 OR52K2Q8NGK3 314 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 NXPE2Q96DL1 559 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 SERAC1Q96JX3 654 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 CCDC114Q96M63 670 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 C2orf49Q9BVC5 232 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 STK33Q9BYT3 514 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 ARHGEF38Q9NXL2 777 aa16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 FARP1Q9Y4F1 1045 aaPredicted RBP16.16■□□□□ 0.18
CHCHD3-204ENST00000457942 VILLO15195 856 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 ATXN7O15265 892 aaPredicted RBP16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 CNTN5O94779 1100 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 GFPT2O94808 682 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 MMEP08473 750 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 CD38P28907 300 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 SCNN1AP37088 669 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 EIF2S3P41091 472 aaKnown RBP16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 GABRB2P47870 512 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 CXCR3P49682 368 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 CCR5P51681 352 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 PPP2CBP62714 309 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 PPP2CAP67775 309 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 DNAJC3Q13217 504 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 SLC25A52Q3SY17 297 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 ALFQ53S48 1182 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 PRAMEF14Q5SWL7 426 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 DPY19L2P1Q6NXN4 242 aa16.15■□□□□ 0.18
CHCHD3-204ENST00000457942 DBX2Q6ZNG2 339 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms