RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 MEI4A8MW99 385 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 ATMINO43313 823 aaPredicted RBP23.74■■□□□ 1.39
CBX3-204ENST00000456948 PRPSAP2O60256 369 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 RECQLP46063 649 aaPredicted RBP23.74■■□□□ 1.39
CBX3-204ENST00000456948 GNA12Q03113 381 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 DLG2Q15700 870 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 RAB6CQ53S08 254 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 CCDC122Q5T0U0 273 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 IL31Q6EBC2 164 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 ALKBH5Q6P6C2 394 aaKnown RBP23.74■■□□□ 1.39
CBX3-204ENST00000456948 ERMP1Q7Z2K6 904 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 FAM124AQ86V42 546 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 MMAAQ8IVH4 418 aaKnown RBP23.74■■□□□ 1.39
CBX3-204ENST00000456948 SH2D3CQ8N5H7 860 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 PTPRN2Q92932 1015 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 TRIM5Q9C035 493 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 RAB6CQ9H0N0 254 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 MAGEH1Q9H213 219 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 PABPC3Q9H361 631 aaKnown RBP23.74■■□□□ 1.39
CBX3-204ENST00000456948 TMEM248Q9NWD8 314 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 PILRBQ9UKJ0 227 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 FZD10Q9ULW2 581 aa23.74■■□□□ 1.39
CBX3-204ENST00000456948 CEP192Q8TEP8 1941 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 CXorf51AA0A1B0GTR3 108 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 CBX4O00257 560 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 CREB3O43889 395 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 C5AR1P21730 350 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 EPHB2P29323 1055 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 CCDC15Q0P6D6 951 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 SF3A2Q15428 464 aaKnown RBP23.73■■□□□ 1.39
CBX3-204ENST00000456948 CST6Q15828 149 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 DUOXA1Q1HG43 343 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 MANEALQ5VSG8 457 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 OR52K2Q8NGK3 314 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 MTG2Q9H4K7 406 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 FBXL12Q9NXK8 326 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 EVLQ9UI08 416 aaPredicted RBP23.73■■□□□ 1.39
CBX3-204ENST00000456948 VPS51Q9UID3 782 aa23.73■■□□□ 1.39
CBX3-204ENST00000456948 A0A0D9SEW6 157 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 C1QTNF3-AMACRE9PGA6 284 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 ALOX15BO15296 676 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 FGF10O15520 208 aaPredicted RBP23.72■■□□□ 1.39
CBX3-204ENST00000456948 RAMP2O60895 175 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 IL1BP01584 269 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 ITPKAP23677 461 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 SLC8A1P32418 973 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 NUMBP49757 651 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 ZNF135P52742 658 aaPredicted RBP23.72■■□□□ 1.39
CBX3-204ENST00000456948 PIGHQ14442 188 aaPredicted RBP23.72■■□□□ 1.39
CBX3-204ENST00000456948 ERMARDQ5T6L9 678 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 PSTKQ8IV42 348 aaKnown RBP23.72■■□□□ 1.39
CBX3-204ENST00000456948 CNGA4Q8IV77 575 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 STK40Q8N2I9 435 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 DNAJC7Q99615 494 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 RTKNQ9BST9 563 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 DLL3Q9NYJ7 618 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 DNAI1Q9UI46 699 aa23.72■■□□□ 1.39
CBX3-204ENST00000456948 MUC22E2RYF6 1773 aaPredicted RBP23.72■■□□□ 1.39
CBX3-204ENST00000456948 A0A087X0T9 212 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 METTL12A8MUP2 240 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FAM72CH0Y354 149 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 SEMA4FO95754 770 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FAM228BP0C875 321 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FOXK2Q01167 660 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 OGDHQ02218 1023 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 POLD3Q15054 466 aaPredicted RBP23.71■■□□□ 1.39
CBX3-204ENST00000456948 TRIM61Q5EBN2 209 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FAM72AQ5TYM5 149 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FAM72DQ6L9T8 149 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 SARM1Q6SZW1 724 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FAM72BQ86X60 149 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 ZNF354CQ86Y25 554 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 OR7D4Q8NG98 312 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FRS2Q8WU20 508 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FAM129BQ96TA1 746 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 PSMB7Q99436 277 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 CD93Q9NPY3 652 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 ARHGAP20Q9P2F6 1191 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 IP6K2Q9UHH9 426 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 FZD4Q9ULV1 537 aa23.71■■□□□ 1.39
CBX3-204ENST00000456948 SSU72P8A0A1W2PR75 194 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 LRRC72A6NJI9 287 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 MCF2LO15068 1137 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 DAPK3O43293 454 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 AKR1B10O60218 316 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 SNAP91O60641 907 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 RNASEH2AO75792 299 aaKnown RBP23.7■■□□□ 1.38
CBX3-204ENST00000456948 CFIP05156 583 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 SRCP12931 536 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 EIF4A3P38919 411 aaKnown RBP23.7■■□□□ 1.38
CBX3-204ENST00000456948 PSMD8P48556 350 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 LIMK1P53667 647 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 TPI1P60174 286 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 GFPT1Q06210 699 aaPredicted RBP23.7■■□□□ 1.38
CBX3-204ENST00000456948 SLC23A3Q6PIS1 610 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 NLRP14Q86W24 1093 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 DNAAF5Q86Y56 855 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 SLC41A1Q8IVJ1 513 aa23.7■■□□□ 1.38
CBX3-204ENST00000456948 RTL3Q8N8U3 475 aaKnown RBP23.7■■□□□ 1.38
CBX3-204ENST00000456948 CEP44Q9C0F1 390 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms