RNA–Protein interactions for RNA: ENST00000456608.1

CASC4P1-201, Transcript of cancer susceptibility 4 pseudogene 1, humanhuman

BASIC

Gene CASC4P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4P1-201ENST00000456608 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 E2F8A0AVK6 867 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 ILVBLA1L0T0 632 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 GOLGA6BA6NDN3 693 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 J3KR12 359 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 SCAMP3O14828 347 aaKnown RBP13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 APRTP07741 180 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 NUDT17P0C025 328 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 TCF3P15923 654 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 CEBPBP17676 345 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 NFKB1P19838 968 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 ACVRL1P37023 503 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 AVPR1AP37288 418 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 IFNAR2P48551 515 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 CDK16Q00536 496 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 GNA12Q03113 381 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 TNK2Q07912 1038 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 IL10RBQ08334 325 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 PDIA2Q13087 525 aaKnown RBP13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 ZNF177Q13360 481 aaPredicted RBP13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 HIF1AQ16665 826 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 ANO4Q32M45 955 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 MSS51Q4VC12 460 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 C6orf118Q5T5N4 469 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 TMEM184AQ6ZMB5 413 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 ZNF534Q76KX8 674 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 SETD3Q86TU7 594 aaPredicted RBP13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 BBS7Q8IWZ6 715 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 OR52K2Q8NGK3 314 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 USP13Q92995 863 aaPredicted RBP13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 PPP2R3CQ969Q6 453 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 TMA16Q96EY4 203 aaKnown RBP13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 SERPINB12Q96P63 405 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 SP110Q9HB58 689 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 RSPH14Q9UHP6 348 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 CCL26Q9Y258 94 aa13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 MRPS23Q9Y3D9 190 aaKnown RBP13.32□□□□□ -0.28
CASC4P1-201ENST00000456608 KIF26AQ9ULI4 1882 aaPredicted RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 E7EVH7 732 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 PRAMEF11O60813 436 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 TBL1XO60907 577 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 TTC4O95801 387 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 GLP2RO95838 553 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 RHOCP08134 193 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 HOXD9P28356 352 aaPredicted RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 WEE1P30291 646 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 MAGEA3P43357 314 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 USP4Q13107 963 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 HNRNPDQ14103 355 aaKnown RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 ZNF77Q15935 545 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 KYNUQ16719 465 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 SYCP2LQ5T4T6 812 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 RNF43Q68DV7 783 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 CXorf57Q6NSI4 855 aaKnown RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 TMC5Q6UXY8 1006 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 ZNF783Q6ZMS7 281 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 CAND1Q86VP6 1230 aaKnown RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 PDIK1LQ8N165 341 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 TEX26Q8N6G2 289 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 TDRD5Q8NAT2 981 aaKnown RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 OR7D4Q8NG98 312 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 RIN3Q8TB24 985 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 ITFG1Q8TB96 612 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 ZNF419Q96HQ0 510 aaPredicted RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 C9orf72Q96LT7 481 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 ZSWIM3Q96MP5 696 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 AGAP3Q96P47 875 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 NSUN3Q9H649 340 aaKnown RBP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 PDFQ9HBH1 243 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 GLOD4Q9HC38 313 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 TDP1Q9NUW8 608 aa13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 RBM22Q9NW64 420 aaKnown RBP eCLIP13.31□□□□□ -0.28
CASC4P1-201ENST00000456608 A0A0D9SEW6 157 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 TYW5A2RUC4 315 aaKnown RBP13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 ERI2A8K979 691 aaKnown RBP13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 F5H423 210 aaPredicted RBP13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 BANF1O75531 89 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 SUN1O94901 812 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 LUC7L3O95232 432 aaKnown RBP13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 PRAMEF12O95522 483 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 SYF2O95926 243 aaKnown RBP13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 HLA-DQB2P05538 268 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 MLNP12872 115 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 FAM193AP78312 1265 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 HYAL1Q12794 435 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 FASTKD3Q14CZ7 662 aaKnown RBP13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 MPPE1Q53F39 396 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 DENND2CQ68D51 928 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 KCTD11Q693B1 232 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 EFHBQ8N7U6 833 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 ING5Q8WYH8 240 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 TTC25Q96NG3 672 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 ZNF599Q96NL3 588 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 FCRL5Q96RD9 977 aa13.3□□□□□ -0.28
CASC4P1-201ENST00000456608 SH3GL2Q99962 352 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms