RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 CSNK1EP49674 416 aaKnown RBP10.95□□□□□ -0.66
DDX39A-203ENST00000454233 TPM4P67936 248 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
DDX39A-203ENST00000454233 PTP4A2Q12974 167 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 PPP1R2P3Q6NXS1 205 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 DNAJC24Q6P3W2 148 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 ZNF783Q6ZMS7 281 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 Q6ZVU0 165 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 PIP4P1Q86T03 277 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 AADATQ8N5Z0 425 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 C3orf20Q8ND61 904 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 OR14C36Q8NHC7 312 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 FAM172AQ8WUF8 416 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 SKA1Q96BD8 255 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 PSMB7Q99436 277 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 SPON2Q9BUD6 331 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 GAREM1Q9H706 876 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 TM9SF3Q9HD45 589 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
DDX39A-203ENST00000454233 PPARGC1AQ9UBK2 798 aaKnown RBP10.95□□□□□ -0.66
DDX39A-203ENST00000454233 OR12D3Q9UGF7 316 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 VPS51Q9UID3 782 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 TPX2Q9ULW0 747 aaKnown RBP10.95□□□□□ -0.66
DDX39A-203ENST00000454233 HS3ST2Q9Y278 367 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 PCDHB9Q9Y5E1 797 aa10.95□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3DA0A087WVF3 549 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3IA0A087WXS9 549 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3EA0A087X179 549 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3KA0A087X1G2 549 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 A0A0D9SEW6 157 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 A0A1W2PPC4 97 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3FA6NER0 549 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 SIGLEC16A6NMB1 481 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3LB9A6J9 549 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 CBX4O00257 560 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 MCF2LO15068 1137 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 SLC7A4O43246 635 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 GJB3O75712 270 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 SERPINC1P01008 464 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 IGHV4-34P06331 123 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3HP0C7X1 549 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 ZNF883P0CG24 379 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 SRCP12931 536 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 CD59P13987 128 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 RFC1P35251 1148 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 ETFBP38117 255 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 RECQLP46063 649 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 CCR5P51681 352 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 CLCN6P51797 869 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 ADPRHP54922 357 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 RACK1P63244 317 aaKnown RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 SHC2P98077 582 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 NRG1Q02297 640 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 FOXC1Q12948 553 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 HLA-BQ31612 363 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3GQ6DHY5 549 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3CQ6IPX1 549 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 ACAD10Q6JQN1 1059 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 RETSATQ6NUM9 610 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 RWDD4Q6NW29 188 aaKnown RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 WDR59Q6PJI9 974 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 MON1BQ7L1V2 547 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 DRC7Q8IY82 874 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 TBC1D3Q8IZP1 549 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 OR7D4Q8NG98 312 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 PIP4K2CQ8TBX8 421 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 CENPIQ92674 756 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 CNTNAP3BQ96NU0 1288 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 ACE2Q9BYF1 805 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-203ENST00000454233 CNTNAP3Q9BZ76 1288 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 OSBPL2Q9H1P3 480 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 RETREG1Q9H6L5 497 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 ATP13A1Q9HD20 1204 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 ANKRD6Q9Y2G4 727 aa10.94□□□□□ -0.66
DDX39A-203ENST00000454233 DNAH14Q0VDD8 3507 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SPAARA0A1B0GVQ0 90 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 A0A1W2PQC6 194 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SH3BP5O60239 455 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 MT-CO1P00395 513 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 RHOQP17081 205 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 PTMSP20962 102 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 RRM1P23921 792 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 DRD3P35462 400 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 MAPKAPK2P49137 400 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 ZNF143P52747 638 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-203ENST00000454233 HDAC4P56524 1084 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 C21orf59P57076 290 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SIM1P81133 766 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-203ENST00000454233 GNA12Q03113 381 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SLC20A2Q08357 652 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 CCDC15Q0P6D6 951 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SUZ12Q15022 739 aaKnown RBP10.93□□□□□ -0.66
DDX39A-203ENST00000454233 ASIC2Q16515 512 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 KIF19Q2TAC6 998 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 KLHL40Q2TBA0 621 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 RAB6CQ53S08 254 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 SCYL2Q6P3W7 929 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 C22orf39Q6P5X5 142 aa10.93□□□□□ -0.66
DDX39A-203ENST00000454233 DCUN1D2Q6PH85 259 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms