RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 HOXA4Q00056 320 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 ERV3-1Q14264 604 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 KRT32Q14532 448 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 LARS2Q15031 903 aaKnown RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 SEC23BQ15437 767 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 RUNDC3AQ59EK9 446 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 CFAP58Q5T655 872 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 MTFR2Q6P444 385 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 KRT74Q7RTS7 529 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 GALNT7Q86SF2 657 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 CHD1LQ86WJ1 897 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 CAVIN3Q969G5 261 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 ATP6V1E2Q96A05 226 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 REPS1Q96D71 796 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 GPR78Q96P69 363 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 NR1H4Q96RI1 486 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 TIMP4Q99727 224 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 BARD1Q99728 777 aaKnown RBP4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 HDHD5Q9BXW7 423 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 CTDSP1Q9GZU7 261 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 USP44Q9H0E7 712 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 TOR3AQ9H497 397 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 SLITRK6Q9H5Y7 841 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 TXNRD2Q9NNW7 524 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 HDAC6Q9UBN7 1215 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 ODF2LQ9ULJ1 636 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 ST3GAL5Q9UNP4 418 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 GPR34Q9UPC5 381 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 PKP3Q9Y446 797 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 CEP170Q5SW79 1584 aa4.09□□□□□ -1.75
HMGB1P15-201ENST00000453854 A0A1W2PQM1 296 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 PI4KAP2A4QPH2 592 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MCIDASD6RGH6 385 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 DSCR3O14972 297 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 TNFSF14O43557 240 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MAPKBP1O60336 1514 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 DKC1O60832 514 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ZNF202O95125 648 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 SGPL1O95470 568 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 CLEC3BP05452 202 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ENO1P06733 434 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 SLC3A2P08195 630 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ALDOCP09972 364 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 CYP4B1P13584 511 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 PKMP14618 531 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 WT1P19544 449 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 TGM2P21980 687 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 GGT5P36269 586 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 GJC1P36383 396 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 PAFAH1B1P43034 410 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MTNR1AP48039 350 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ARHGAP8P85298 464 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 PLIN5Q00G26 463 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 GOLGA8FQ08AF8 430 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 KCNB1Q14721 858 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MEA1Q16626 185 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 GXYLT1Q4G148 440 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 GLE1Q53GS7 698 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 SH2D4BQ5SQS7 431 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ABCC10Q5T3U5 1492 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 HAUS3Q68CZ6 603 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 CEP85Q6P2H3 762 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 GJB7Q6PEY0 223 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ZNF474Q6S9Z5 364 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 CASC1Q6TDU7 716 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 NAPRTQ6XQN6 538 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 TRIM72Q6ZMU5 477 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 DCDC5Q6ZRR9 648 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 SLC29A4Q7RTT9 530 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MDGA2Q7Z553 956 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ADGRG6Q86SQ4 1221 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 RFX6Q8HWS3 928 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 BRSK2Q8IWQ3 736 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 DIS3L2Q8IYB7 885 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 NGEFQ8N5V2 710 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 CREB3L4Q8TEY5 395 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 KCNJ9Q92806 393 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 DAZAP1Q96EP5 407 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ASB2Q96Q27 587 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 FYTTD1Q96QD9 318 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MAGI1Q96QZ7 1491 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 NPLQ9BXD5 320 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MRPL9Q9BYD2 267 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MROH8Q9H579 483 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ASNSD1Q9NWL6 643 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ALKBH4Q9NXW9 302 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 TAS2R10Q9NYW0 307 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 CFDP1Q9UEE9 299 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 ISY1Q9ULR0 285 aaKnown RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 OSGIN2Q9Y236 505 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 DTX4Q9Y2E6 619 aa4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 MAGED1Q9Y5V3 778 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P15-201ENST00000453854 POLR2AP24928 1970 aaKnown RBP4.07□□□□□ -1.76
HMGB1P15-201ENST00000453854 SHROOM2Q13796 1616 aa4.07□□□□□ -1.76
HMGB1P15-201ENST00000453854 GTPBP10A4D1E9 387 aaKnown RBP4.07□□□□□ -1.76
HMGB1P15-201ENST00000453854 B4DLN1 442 aa4.07□□□□□ -1.76
HMGB1P15-201ENST00000453854 MASP2O00187 686 aa4.07□□□□□ -1.76
HMGB1P15-201ENST00000453854 TSPAN4O14817 238 aa4.07□□□□□ -1.76
HMGB1P15-201ENST00000453854 EXOC3O60645 756 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms