RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 PSMB4P28070 264 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 HOXD9P28356 352 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ACTN2P35609 894 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 MAGEA3P43357 314 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 PMS2P54278 862 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 BASP1P80723 227 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 GNA12Q03113 381 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 IL10RBQ08334 325 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 SLC10A7Q0GE19 358 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 USP4Q13107 963 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ADAM15Q13444 863 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 HNRNPDQ14103 355 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 IHHQ14623 411 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 CBX2Q14781 532 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 SLMAPQ14BN4 828 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 POLD3Q15054 466 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ZNF77Q15935 545 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 PARP15Q460N3 678 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TCEAL5Q5H9L2 206 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 FSCBQ5H9T9 825 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 RARS2Q5T160 578 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 MPP7Q5T2T1 576 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TTC39BQ5VTQ0 682 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ALS2CLQ60I27 953 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 KCTD11Q693B1 232 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TIGD7Q6NT04 549 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ANKRD54Q6NXT1 300 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ELMSAN1Q6PJG2 1045 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 CHRDL2Q6WN34 429 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ARHGEF18Q6ZSZ5 1173 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 GPR149Q86SP6 731 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 SETD3Q86TU7 594 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 CAND1Q86VP6 1230 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ARID3BQ8IVW6 561 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ATPAF2Q8N5M1 289 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TEX26Q8N6G2 289 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 EFHBQ8N7U6 833 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 MCUQ8NE86 351 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 OR7D4Q8NG98 312 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 WFDC5Q8TCV5 224 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 USP33Q8TEY7 942 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ING5Q8WYH8 240 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 EXOC4Q96A65 974 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 RSPRY1Q96DX4 576 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TMA16Q96EY4 203 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 LMLNQ96KR4 655 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 LRRC3BQ96PB8 259 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ZIM3Q96PE6 472 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 FERMT1Q9BQL6 677 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 WDR83Q9BRX9 315 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 MLPHQ9BV36 600 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ACE2Q9BYF1 805 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 PHACTR1Q9C0D0 580 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TSPYL1Q9H0U9 437 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 GBA3Q9H227 469 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 PABPC3Q9H361 631 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 CDC42EP4Q9H3Q1 356 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ZNF576Q9H609 170 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 IGFLR1Q9H665 355 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 PIDD1Q9HB75 910 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 PDFQ9HBH1 243 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 EIF2B3Q9NR50 452 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TDP1Q9NUW8 608 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 DNAJC17Q9NVM6 304 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 DZANK1Q9NVP4 752 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 NINJ2Q9NZG7 142 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 LMCD1Q9NZU5 365 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 SEPT10Q9P0V9 454 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 KLHL8Q9P2G9 620 aaPredicted RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ZMYM5Q9UJ78 669 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 CDH22Q9UJ99 828 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 LSM7Q9UK45 103 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 TRHDEQ9UKU6 1024 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 CLEC4EQ9ULY5 219 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 MRPS23Q9Y3D9 190 aaKnown RBP6.13□□□□□ -1.43
SDC4P-201ENST00000453285 SH3BP1Q9Y3L3 701 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 OR51B4Q9Y5P0 310 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 C5orf42Q9H799 3197 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 COL4A3Q01955 1670 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 SCN8AQ9UQD0 1980 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 LRRK1Q38SD2 2015 aa6.13□□□□□ -1.43
SDC4P-201ENST00000453285 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.12□□□□□ -1.43
SDC4P-201ENST00000453285 F5H423 210 aaPredicted RBP6.12□□□□□ -1.43
SDC4P-201ENST00000453285 EIF3HO15372 352 aaKnown RBP eCLIP6.12□□□□□ -1.43
SDC4P-201ENST00000453285 RIPK2O43353 540 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 KDELR3O43731 214 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 BANF1O75531 89 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 ZMPSTE24O75844 475 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 STK10O94804 968 aaKnown RBP6.12□□□□□ -1.43
SDC4P-201ENST00000453285 SUN1O94901 812 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 LUC7L3O95232 432 aaKnown RBP6.12□□□□□ -1.43
SDC4P-201ENST00000453285 TTC4O95801 387 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 SYF2O95926 243 aaKnown RBP6.12□□□□□ -1.43
SDC4P-201ENST00000453285 CD160O95971 181 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 HLA-DQB2P05538 268 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 APRTP07741 180 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 RHOCP08134 193 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 NUDT17P0C025 328 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 NFKB1P19838 968 aa6.12□□□□□ -1.43
SDC4P-201ENST00000453285 POU3F3P20264 500 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms