RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 RPRD1AQ96P16 312 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-214ENST00000452226 CDC6Q99741 560 aa18.93■□□□□ 0.62
PDLIM2-214ENST00000452226 EDEM3Q9BZQ6 932 aa18.93■□□□□ 0.62
PDLIM2-214ENST00000452226 RRN3Q9NYV6 651 aa18.93■□□□□ 0.62
PDLIM2-214ENST00000452226 LHX6Q9UPM6 363 aa18.93■□□□□ 0.62
PDLIM2-214ENST00000452226 BTBD3Q9Y2F9 522 aa18.93■□□□□ 0.62
PDLIM2-214ENST00000452226 KNTC1P50748 2209 aa18.93■□□□□ 0.62
PDLIM2-214ENST00000452226 DOCK9Q9BZ29 2069 aa18.93■□□□□ 0.62
PDLIM2-214ENST00000452226 A0A1W2PPC4 97 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 H0Y8X5 98 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 GOLGA6L19H0YKK7 550 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 IL1BP01584 269 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 CCDC172P0C7W6 258 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 VAV1P15498 845 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 GOT1P17174 413 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 C5AR1P21730 350 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 CTSKP43235 329 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 UBASH3AP57075 661 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 C21orf59P57076 290 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 MTA1Q13330 715 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 ELAVL3Q14576 367 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 C2CD6Q53TS8 623 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 FIGNQ5HY92 759 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 OTUD1Q5VV17 481 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 LRSAM1Q6UWE0 723 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 SND1Q7KZF4 910 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 ARCQ7LC44 396 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 SLC6A18Q96N87 628 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 NPY6RQ99463 290 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 AGPAT1Q99943 283 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 SYT11Q9BT88 431 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 ACE2Q9BYF1 805 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 TMEM59LQ9UK28 342 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 VANGL2Q9ULK5 521 aa18.92■□□□□ 0.62
PDLIM2-214ENST00000452226 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 M0QYT0 321 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 VILLO15195 856 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 PAGE1O75459 146 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 ATXN1LP0C7T5 689 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 CCT8P50990 548 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 IRAK1P51617 712 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 PTP4A2Q12974 167 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 ZNF177Q13360 481 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 CLEC16AQ2KHT3 1053 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 FAM102AQ5T9C2 384 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 OR14C36Q8NHC7 312 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 SLC30A5Q8TAD4 765 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 FRS2Q8WU20 508 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 PGAP3Q96FM1 320 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 PPP1R9BQ96SB3 815 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 EBF2Q9HAK2 575 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 AIPL1Q9NZN9 384 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 HS3ST4Q9Y661 456 aa18.91■□□□□ 0.62
PDLIM2-214ENST00000452226 FAM170AA1A519 330 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 LRRC53A6NM62 1247 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 PCDHGA12O60330 932 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 DFNA5O60443 496 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 GGCXP38435 758 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 GRK6P43250 576 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 CCR5P51681 352 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 ADPRHP54922 357 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 GSCP56915 257 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 RNASE9P60153 205 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 IL9RQ01113 521 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 ACCSLQ4AC99 568 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 TRNP1Q6NT89 227 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 BNIPLQ7Z465 357 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 C14orf80Q86SX3 495 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 PROSER1Q86XN7 944 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 PHF13Q86YI8 300 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 OR52K2Q8NGK3 314 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 SKA1Q96BD8 255 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 ALG14Q96F25 216 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 FEM1AQ9BSK4 669 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 SIK2Q9H0K1 926 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 AASDHPPTQ9NRN7 309 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 TOR4AQ9NXH8 423 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 SLC25A13Q9UJS0 675 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 APC2O95996 2303 aa18.9■□□□□ 0.62
PDLIM2-214ENST00000452226 GOLGA8CPA6NN73 597 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 C10orf142B7Z368 130 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 CLDN11O75508 207 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 WNT1P04628 370 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 TFE3P19532 575 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 FLT3P36888 993 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 VASPP50552 380 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 SCAPQ12770 1279 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 COL9A2Q14055 689 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 SLC25A52Q3SY17 297 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 E4F1Q66K89 784 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 CCNI2Q6ZMN8 369 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 DSG4Q86SJ6 1040 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 OR8D1Q8WZ84 308 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 C11orf70Q9BRQ4 267 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 TSPY26PQ9H489 355 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 CCDC86Q9H6F5 360 aaKnown RBP18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 PIGVQ9NUD9 493 aa18.89■□□□□ 0.61
PDLIM2-214ENST00000452226 TMEM51Q9NW97 253 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms