RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TPI1P60174 286 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 LEXMQ3ZCV2 418 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 RARS2Q5T160 578 aaKnown RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 HHATQ5VTY9 493 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 STEAP4Q687X5 459 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 TMC5Q6UXY8 1006 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 TAC4Q86UU9 113 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 THEM5Q8N1Q8 247 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 ZNF276Q8N554 614 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 SMRP1Q8NCR6 262 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 KLF6Q99612 283 aaPredicted RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 TRIM56Q9BRZ2 755 aaKnown RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 S1PR5Q9H228 398 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 ABCF3Q9NUQ8 709 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.97□□□□□ -0.653e-13■■■■□ 21.8
PKP4-206ENST00000452162 ARL2BPQ9Y2Y0 163 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 IKBKGQ9Y6K9 419 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 FAM159BA6NKW6 160 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 ZNF189O75820 626 aaPredicted RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 SEC24AO95486 1093 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 C1RP00736 705 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 DNAJC3Q13217 504 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 GPR17Q13304 367 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 MAPRE1Q15691 268 aaKnown RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 PARP6Q2NL67 630 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 TTC39BQ5VTQ0 682 aaPredicted RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 BSPRYQ5W0U4 402 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 BEND5Q7L4P6 421 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 LRRC6Q86X45 466 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.97□□□□□ -0.656e-6■□□□□ 8.7
PKP4-206ENST00000452162 ZNF567Q8N184 647 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 PIAS4Q8N2W9 510 aaPredicted RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 PPM1NQ8N819 430 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 GSDMBQ8TAX9 411 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 TCP10LQ8TDR4 215 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 APOPT1Q96IL0 206 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 OXCT2Q9BYC2 517 aaPredicted RBP10.97□□□□□ -0.65
PKP4-206ENST00000452162 PITPNM3Q9BZ71 974 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 ZCWPW1Q9H0M4 648 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 DZANK1Q9NVP4 752 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 IGSF9Q9P2J2 1179 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 STARD13Q9Y3M8 1113 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 NOTCH4Q99466 2003 aa10.97□□□□□ -0.65
PKP4-206ENST00000452162 GRXCR2A6NFK2 248 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 GOLGA8RI6L899 631 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 IGLV3-25P01717 112 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 C8AP07357 584 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 GSTA1P08263 222 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 CSH1P0DML2 217 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 CSH2P0DML3 217 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 ALADP13716 330 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 HOXB8P17481 243 aaPredicted RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 ADRA1DP25100 572 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 PSMB4P28070 264 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 ZNF135P52742 658 aaPredicted RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 SARNPP82979 210 aaKnown RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 EIF4EBP2Q13542 120 aaPredicted RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 ARL13BQ3SXY8 428 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 SLC39A12Q504Y0 691 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 TPGS2Q68CL5 300 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 LRRC8BQ6P9F7 803 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 TRMT10BQ6PF06 316 aaKnown RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 FAM47EQ6ZV65 393 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 PDZD4Q76G19 769 aaPredicted RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 NPWQ8N729 165 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 PDCD7Q8N8D1 485 aaKnown RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 ATAD1Q8NBU5 361 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 CCNYQ8ND76 341 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 DQX1Q8TE96 717 aaKnown RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 FERMT1Q9BQL6 677 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 PLCD4Q9BRC7 762 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 CEP41Q9BYV8 373 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 CRISPLD1Q9H336 500 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 SLC17A7Q9P2U7 560 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 AFF4Q9UHB7 1163 aaKnown RBP10.96□□□□□ -0.65
PKP4-206ENST00000452162 SLC12A4Q9UP95 1085 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 SNX10Q9Y5X0 201 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 MAD1L1Q9Y6D9 718 aa10.96□□□□□ -0.65
PKP4-206ENST00000452162 TTC28Q96AY4 2481 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 CCDC195A0A1B0GUA6 201 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 MTMR11A4FU01 709 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 F5H423 210 aaPredicted RBP10.96□□□□□ -0.66
PKP4-206ENST00000452162 MBTPS2O43462 519 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 EDF1O60869 148 aaKnown RBP10.96□□□□□ -0.66
PKP4-206ENST00000452162 DHRS4L1P0CG22 281 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 TSPY1Q01534 308 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 PPIDQ08752 370 aaKnown RBP10.96□□□□□ -0.66
PKP4-206ENST00000452162 RNF43Q68DV7 783 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 PTCRAQ6ISU1 281 aaPredicted RBP10.96□□□□□ -0.66
PKP4-206ENST00000452162 CYS1Q717R9 158 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 PACS2Q86VP3 889 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 CTAGE3PQ8IX95 158 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 LRRC8CQ8TDW0 803 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 STAMBPL1Q96FJ0 436 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 TKTL2Q9H0I9 626 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 C12orf65Q9H3J6 166 aaKnown RBP10.96□□□□□ -0.66
PKP4-206ENST00000452162 WDCPQ9H6R7 721 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 SFXN1Q9H9B4 322 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 CYP4F11Q9HBI6 524 aa10.96□□□□□ -0.66
PKP4-206ENST00000452162 SLCO1B3Q9NPD5 702 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms