RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, human

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF4-208	ENST00000452047	STAT1	P42224	750 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	GSC	P56915	257 aa	Predicted RBP	12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	PTP4A2	Q12974	167 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	TEAD4	Q15561	434 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	DLG2	Q15700	870 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	RAB6C	Q53S08	254 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	KCNT1	Q5JUK3	1230 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	TRIM72	Q6ZMU5	477 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	DBX2	Q6ZNG2	339 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047		Q6ZVU0	165 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	TFAP2D	Q7Z6R9	452 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	SETD3	Q86TU7	594 aa	Predicted RBP	12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	FAM131B	Q86XD5	332 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	SLC30A5	Q8TAD4	765 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	PCDHB18P	Q96TA0	734 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	C11orf70	Q9BRQ4	267 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	SCNM1	Q9BWG6	230 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	RAB6C	Q9H0N0	254 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	VPS51	Q9UID3	782 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	PCOLCE2	Q9UKZ9	415 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	PCDHGB2	Q9Y5G2	931 aa		12.8	□□□□□ -0.36
CPSF4-208	ENST00000452047	DOCK9	Q9BZ29	2069 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047		A0A0D9SEW6	157 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	C2CD4B	A6NLJ0	364 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	MCF2L	O15068	1137 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	ALOX15B	O15296	676 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	LAT	O43561	262 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	HYAL3	O43820	417 aa	Predicted RBP	12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	SNAP91	O60641	907 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	ATP1A3	P13637	1013 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	CTSK	P43235	329 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	CCR5	P51681	352 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	RACK1	P63244	317 aa	Known RBP	12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	ATP11A	P98196	1134 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	UBXN1	Q04323	297 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	TYRO3	Q06418	890 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	TRIP6	Q15654	476 aa	Known RBP	12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	ST3GAL2	Q16842	350 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	CCDC14	Q49A88	953 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	ACCSL	Q4AC99	568 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	LRRC31	Q6UY01	552 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	DSG4	Q86SJ6	1040 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	GLRX5	Q86SX6	157 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	DCAF4L2	Q8NA75	395 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	ANKRD20A12P	Q8NF67	263 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	NEK11	Q8NG66	645 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	OR14C36	Q8NHC7	312 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	JOSD2	Q8TAC2	188 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	BAHD1	Q8TBE0	780 aa	Predicted RBP	12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	OR8D1	Q8WZ84	308 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	SLC6A18	Q96N87	628 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	TMEM63C	Q9P1W3	806 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	PPM1H	Q9ULR3	514 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047	LAMA5	O15230	3695 aa		12.79	□□□□□ -0.36
CPSF4-208	ENST00000452047		K7ERQ8	282 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PLK4	O00444	970 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	VILL	O15195	856 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	SLC7A4	O43246	635 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PLRG1	O43660	514 aa	Known RBP	12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	GJB6	O95452	261 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	WNT1	P04628	370 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	CTSL	P07711	333 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	GLDC	P23378	1020 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	RRM1	P23921	792 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	OR1E1	P30953	314 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PTPN9	P43378	593 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PPP2CB	P62714	309 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PPP2CA	P67775	309 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	KRT83	P78385	493 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	NRG1	Q02297	640 aa	Predicted RBP	12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	CDO1	Q16878	200 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	CLEC16A	Q2KHT3	1053 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	ZNF423	Q2M1K9	1284 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	C6orf118	Q5T5N4	469 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	MANEAL	Q5VSG8	457 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	AGBL4	Q5VU57	503 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	LRSAM1	Q6UWE0	723 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	MON1B	Q7L1V2	547 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PHLDB2	Q86SQ0	1253 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PHF13	Q86YI8	300 aa	Predicted RBP	12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	AOPEP	Q8N6M6	819 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	OR7D4	Q8NG98	312 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	OR2A12	Q8NGT7	310 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PIP4K2C	Q8TBX8	421 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	RXFP2	Q8WXD0	754 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	CENPI	Q92674	756 aa	Predicted RBP	12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	GATA6	Q92908	595 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	ZYG11B	Q9C0D3	744 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	KDM4C	Q9H3R0	1056 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	PPARGC1A	Q9UBK2	798 aa	Known RBP	12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	TPX2	Q9ULW0	747 aa	Known RBP	12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	NEU3	Q9UQ49	428 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	NEUROG3	Q9Y4Z2	214 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	CHD6	Q8TD26	2715 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047	CELSR3	Q9NYQ7	3312 aa		12.78	□□□□□ -0.36
CPSF4-208	ENST00000452047		A0A1W2PR77	199 aa		12.77	□□□□□ -0.37
CPSF4-208	ENST00000452047	TCRBV5S1A1T	A0A578	114 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms