RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 LSM8O95777 96 aaKnown RBP22.23■■□□□ 1.15
C9orf3-208ENST00000451893 TUBB4AP04350 444 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 RHOCP08134 193 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 KRT83P78385 493 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 NCEH1Q6PIU2 408 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 WDR59Q6PJI9 974 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 UNQ6494/PRO21346Q6UXR6 183 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 OR14C36Q8NHC7 312 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 OR8D1Q8WZ84 308 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 IGSF8Q969P0 613 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 CAMK1GQ96NX5 476 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 NEUROG2Q9H2A3 272 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 NLRC4Q9NPP4 1024 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 AASDHPPTQ9NRN7 309 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 PIGVQ9NUD9 493 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 FZD4Q9ULV1 537 aa22.23■■□□□ 1.15
C9orf3-208ENST00000451893 FARP1Q9Y4F1 1045 aaPredicted RBP22.23■■□□□ 1.15
C9orf3-208ENST00000451893 CACNA1BQ00975 2339 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 SSU72P8A0A1W2PR75 194 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 C1QTNF3-AMACRE9PGA6 284 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 HYAL3O43820 417 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-208ENST00000451893 GFPT2O94808 682 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 SERPING1P05155 500 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 C5AR1P21730 350 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 STAT1P42224 750 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 GRIA4P48058 902 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 CDH4P55283 916 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 EIF4EBP2Q13542 120 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-208ENST00000451893 ZNF423Q2M1K9 1284 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 FAM46CQ5VWP2 391 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 NAA35Q5VZE5 725 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 OR2T34Q8NGX1 318 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 CCDC114Q96M63 670 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 ACE2Q9BYF1 805 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-208ENST00000451893 IL21RQ9HBE5 538 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 ANKRD6Q9Y2G4 727 aa22.22■■□□□ 1.15
C9orf3-208ENST00000451893 EPN1Q9Y6I3 576 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-208ENST00000451893 TOP3BO95985 862 aaKnown RBP22.21■■□□□ 1.15
C9orf3-208ENST00000451893 MMEP08473 750 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 GOT1P17174 413 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 CDH5P33151 784 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-208ENST00000451893 SCNN1AP37088 669 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 GALCP54803 685 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 JAM2P57087 298 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-208ENST00000451893 E4F1Q66K89 784 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-208ENST00000451893 CXorf57Q6NSI4 855 aaKnown RBP22.21■■□□□ 1.15
C9orf3-208ENST00000451893 NOP9Q86U38 636 aaKnown RBP22.21■■□□□ 1.15
C9orf3-208ENST00000451893 ZNF677Q86XU0 584 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 CPA5Q8WXQ8 436 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 PTPRN2Q92932 1015 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 TBCBQ99426 244 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 NPY6RQ99463 290 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 APOBEC2Q9Y235 224 aaKnown RBP22.21■■□□□ 1.15
C9orf3-208ENST00000451893 FNDC3AQ9Y2H6 1198 aaKnown RBP22.21■■□□□ 1.15
C9orf3-208ENST00000451893 SNX11Q9Y5W9 270 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 TMEM131Q92545 1883 aa22.21■■□□□ 1.15
C9orf3-208ENST00000451893 MAP1BP46821 2468 aaKnown RBP22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3DA0A087WVF3 549 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3IA0A087WXS9 549 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3EA0A087X179 549 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3KA0A087X1G2 549 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3FA6NER0 549 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3LB9A6J9 549 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 FLRT2O43155 660 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 GJB3O75712 270 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 IPO7O95373 1038 aaKnown RBP22.2■■□□□ 1.14
C9orf3-208ENST00000451893 CCDC175P0C221 793 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3HP0C7X1 549 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 ZNF883P0CG24 379 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 FERP16591 822 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 PRKCIP41743 596 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 GABRB2P47870 512 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 PLK1P53350 603 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 ASIC2Q16515 512 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 KIF19Q2TAC6 998 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 INAVAQ3KP66 663 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 SLC25A52Q3SY17 297 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 C2CD6Q53TS8 623 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 SLC45A4Q5BKX6 768 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 ACBD5Q5T8D3 534 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3GQ6DHY5 549 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3CQ6IPX1 549 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-208ENST00000451893 XYLT1Q86Y38 959 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TBC1D3Q8IZP1 549 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-208ENST00000451893 RHBDD1Q8TEB9 315 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 CCDC42Q96M95 316 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 FEM1AQ9BSK4 669 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 C2orf49Q9BVC5 232 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-208ENST00000451893 OSGEPQ9NPF4 335 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 SEPT11Q9NVA2 429 aaKnown RBP22.2■■□□□ 1.14
C9orf3-208ENST00000451893 SERGEFQ9UGK8 458 aa22.2■■□□□ 1.14
C9orf3-208ENST00000451893 TP53BP1Q12888 1972 aaPredicted RBP22.19■■□□□ 1.14
C9orf3-208ENST00000451893 A0A1W2PPC4 97 aa22.19■■□□□ 1.14
C9orf3-208ENST00000451893 SOWAHDA6NJG2 315 aa22.19■■□□□ 1.14
C9orf3-208ENST00000451893 C1QTNF9BB2RNN3 333 aa22.19■■□□□ 1.14
C9orf3-208ENST00000451893 EIF3CLB5ME19 914 aaKnown RBP22.19■■□□□ 1.14
C9orf3-208ENST00000451893 SRGAP2O75044 1071 aa22.19■■□□□ 1.14
C9orf3-208ENST00000451893 PROS1P07225 676 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms