RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 A0A1W2PPC4 97 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3FA6NER0 549 aaPredicted RBP15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3LB9A6J9 549 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 ALOX15BO15296 676 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 SNAP91O60641 907 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 ENDOD1O94919 500 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 IGHV4-34P06331 123 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3HP0C7X1 549 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 KRT3P12035 628 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 ATP1A3P13637 1013 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 C21orf59P57076 290 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 BNC1Q01954 994 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 CLEC16AQ2KHT3 1053 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 C15orf59Q2T9L4 293 aaPredicted RBP15.66■□□□□ 0.1
CHD3-205ENST00000449744 KIF19Q2TAC6 998 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 CCDC14Q49A88 953 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3GQ6DHY5 549 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3CQ6IPX1 549 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 Q6ZVU0 165 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TBC1D3Q8IZP1 549 aaPredicted RBP15.66■□□□□ 0.1
CHD3-205ENST00000449744 DCAF4L2Q8NA75 395 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 JOSD2Q8TAC2 188 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 SETD7Q8WTS6 366 aaKnown RBP15.66■□□□□ 0.1
CHD3-205ENST00000449744 SKA1Q96BD8 255 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 PCDHB18PQ96TA0 734 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 SPON2Q9BUD6 331 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 IL21RQ9HBE5 538 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TM7SF3Q9NS93 570 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 VPS51Q9UID3 782 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 TPX2Q9ULW0 747 aaKnown RBP15.66■□□□□ 0.1
CHD3-205ENST00000449744 HS3ST2Q9Y278 367 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 ANKRD6Q9Y2G4 727 aa15.66■□□□□ 0.1
CHD3-205ENST00000449744 A0A0D9SEW6 157 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 C2CD4BA6NLJ0 364 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 MCF2LO15068 1137 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 SLC7A4O43246 635 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 ZNF883P0CG24 379 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 SRCP12931 536 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 FERP16591 822 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 CCR5P51681 352 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 CLCN6P51797 869 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 ADPRHP54922 357 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 RACK1P63244 317 aaKnown RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 SUZ12Q15022 739 aaKnown RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 TRIP6Q15654 476 aaKnown RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 FILIP1LQ4L180 1135 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 CAVIN1Q6NZI2 390 aaKnown RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 ZNF783Q6ZMS7 281 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 STRADAQ7RTN6 431 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 APTXQ7Z2E3 356 aaKnown RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 PHF13Q86YI8 300 aaPredicted RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 PIP4K2CQ8TBX8 421 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 SLC6A18Q96N87 628 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 CAMK1GQ96NX5 476 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 PSMB7Q99436 277 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 AGPAT1Q99943 283 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 BPIFA3Q9BQP9 254 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 ACE2Q9BYF1 805 aaPredicted RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 HSD3B7Q9H2F3 369 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 AASDHPPTQ9NRN7 309 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 FNDC3AQ9Y2H6 1198 aaKnown RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 SNX11Q9Y5W9 270 aa15.65■□□□□ 0.1
CHD3-205ENST00000449744 NYNRINQ9P2P1 1898 aaKnown RBP15.65■□□□□ 0.1
CHD3-205ENST00000449744 ILVBLA1L0T0 632 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 ANKRD62A6NC57 917 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 CBX4O00257 560 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 GJB6O95452 261 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 MT-CO1P00395 513 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 GPD1P21695 349 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 ADRA1BP35368 520 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 DRD3P35462 400 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 PTPN9P43378 593 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 RECQLP46063 649 aaPredicted RBP15.64■□□□□ 0.09
CHD3-205ENST00000449744 GSCP56915 257 aaPredicted RBP15.64■□□□□ 0.09
CHD3-205ENST00000449744 PTP4A2Q12974 167 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 POM121L1PQ3SYA9 428 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 SLC45A4Q5BKX6 768 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 RETSATQ6NUM9 610 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 RWDD4Q6NW29 188 aaKnown RBP15.64■□□□□ 0.09
CHD3-205ENST00000449744 LAYNQ6UX15 382 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 DRC7Q8IY82 874 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 OR7D4Q8NG98 312 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 FAM172AQ8WUF8 416 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 ORAI3Q9BRQ5 295 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 KDM4CQ9H3R0 1056 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 ATP13A1Q9HD20 1204 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 PPARGC1AQ9UBK2 798 aaKnown RBP15.64■□□□□ 0.09
CHD3-205ENST00000449744 OR12D3Q9UGF7 316 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 PPM1HQ9ULR3 514 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 PCDHGB2Q9Y5G2 931 aa15.64■□□□□ 0.09
CHD3-205ENST00000449744 K7ERQ8 282 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 PLK4O00444 970 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 VILLO15195 856 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 FLRT2O43155 660 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 TRIM16O95361 564 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 TOP3BO95985 862 aaKnown RBP15.63■□□□□ 0.09
CHD3-205ENST00000449744 DESP17661 470 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 SPINK2P20155 84 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 TNFAIP3P21580 790 aa15.63■□□□□ 0.09
CHD3-205ENST00000449744 RRM1P23921 792 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms