RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 COG7P83436 770 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 CCDC15Q0P6D6 951 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 C10orf120Q5SQS8 335 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 CES3Q6UWW8 571 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 TIFABQ6ZNK6 161 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 ARHGAP12Q8IWW6 846 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 USP33Q8TEY7 942 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 TOP1MTQ969P6 601 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 SPATA17Q96L03 361 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 MLPHQ9BV36 600 aaPredicted RBP16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 CCSER2Q9H7U1 834 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 BFARQ9NZS9 450 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 LTBP2Q14767 1821 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 NYNRINQ9P2P1 1898 aaKnown RBP16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 ACRP10323 421 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 ALDH3A1P30838 453 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 HTR7P34969 479 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC8B1Q6J4K2 584 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 KIAA1841Q6NSI8 718 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 PACS1Q6VY07 963 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 RNF168Q8IYW5 571 aaPredicted RBP16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 ANKLE1Q8NAG6 615 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 C10orf82Q8WW14 230 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 TSSK1BQ9BXA7 367 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 C11orf49Q9H6J7 331 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 CATSPERBQ9H7T0 1116 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 LRRC40Q9H9A6 602 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 NPHS2Q9NP85 383 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 CASS4Q9NQ75 786 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 TLR8Q9NR97 1041 aaKnown RBP16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 IL1RAPL1Q9NZN1 696 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 ZFATQ9P243 1243 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 SEC24AO95486 1093 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 BGNP21810 368 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 GJA8P48165 433 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 MLLT6P55198 1093 aaPredicted RBP16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 NAB1Q13506 487 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 SETDB1Q15047 1291 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 SPANXN3Q5MJ09 141 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 ATPAF2Q8N5M1 289 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 CERS2Q96G23 380 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 LRRC37BQ96QE4 947 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 CLSTN3Q9BQT9 956 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC39A8Q9C0K1 460 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 ECT2Q9H8V3 914 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 MARCH2Q9P0N8 246 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 PSAT1Q9Y617 370 aa16.42■□□□□ 0.22
AP000253.1-201ENST00000449339 TROVE2P10155 538 aaKnown RBP eCLIP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 ERVK-10P10266 1014 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 CCNCP24863 283 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 CRHR1P34998 444 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 RPL10AP62906 217 aaKnown RBP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 SMARCB1Q12824 385 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 OVGP1Q12889 678 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 SMAD1Q15797 465 aaKnown RBP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 FBXO46Q6PJ61 603 aaPredicted RBP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 TMEM135Q86UB9 458 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 LZTR1Q8N653 840 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 CNTD1Q8N815 330 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 ARMC2Q8NEN0 867 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 ZNF689Q96CS4 500 aaPredicted RBP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 FCRL3Q96P31 734 aaPredicted RBP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 TSGA13Q96PP4 275 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 CLIC5Q9NZA1 410 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 UBP1Q9NZI7 540 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 CHKBQ9Y259 395 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC12A8A0AV02 714 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 DCTN3O75935 186 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 ALDOAP04075 364 aaKnown RBP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 CCNB1P14635 433 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 NCALDP61601 193 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 PRPSAP1Q14558 356 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 MS4A13Q5J8X5 152 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 ZNF449Q6P9G9 518 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 RASSF3Q86WH2 238 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 C2orf15Q8WU43 125 aaKnown RBP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 AUTS2Q8WXX7 1259 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 ZNF419Q96HQ0 510 aaPredicted RBP16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 APOL2Q9BQE5 337 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 TXNDC16Q9P2K2 825 aa16.41■□□□□ 0.22
AP000253.1-201ENST00000449339 DOCK4Q8N1I0 1966 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 KLF11O14901 512 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 CERCAMQ5T4B2 595 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 TFAP2DQ7Z6R9 452 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 ZNF398Q8TD17 642 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 ZNF669Q96BR6 464 aaPredicted RBP16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 ERP27Q96DN0 273 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 MECRQ9BV79 373 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 MYLK2Q9H1R3 596 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 BACE2Q9Y5Z0 518 aa16.4■□□□□ 0.22
AP000253.1-201ENST00000449339 ABHD14A-ACY1A0A1B0GW23 586 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 ATP9BO43861 1147 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 MAFKO60675 156 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 CNTN5O94779 1100 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 USP1O94782 785 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 TIMP1P01033 207 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 ITGA2BP08514 1039 aa16.39■□□□□ 0.22
AP000253.1-201ENST00000449339 RFC2P35250 354 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms