RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 HAPLN1P10915 354 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 EIF4A3P38919 411 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MINDY4Q4G0A6 757 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 LY6G5CQ5SRR4 150 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 GPR149Q86SP6 731 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 DSELQ8IZU8 1212 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 LSMEM2Q8N112 164 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC30A5Q8TAD4 765 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 PRR7Q8TB68 274 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZFYVE19Q96K21 471 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 CNDP2Q96KP4 475 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 FERD3LQ96RJ6 166 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 USB1Q9BQ65 265 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MLPHQ9BV36 600 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 DUSP23Q9BVJ7 150 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 XPO4Q9C0E2 1151 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TKTL2Q9H0I9 626 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 VPS9D1Q9Y2B5 631 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TDRD6O60522 2096 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MYH14Q7Z406 1995 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MKRN2OSH3BPM6 223 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 F11P03951 625 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 CYP11B1P15538 503 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SEPHS1P49903 392 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 GCNT1Q02742 428 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 NFATC3Q12968 1075 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAM47EQ6ZV65 393 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 GALNT13Q8IUC8 556 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TCEAL8Q8IYN2 117 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 PRSS58Q8IYP2 241 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 PDIK1LQ8N165 341 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 IPMKQ8NFU5 416 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 HES6Q96HZ4 224 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MAGED4Q96JG8 741 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZYG11BQ9C0D3 744 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MYH13Q9UKX3 1938 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 A0A1W2PQ67 120 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MYBPHLA2RUH7 354 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 RTN2O75298 545 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MYF5P13349 255 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 UGT1A1P22309 533 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 NTSR1P30989 418 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 HSPA9P38646 679 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 VAV2P52735 878 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ERVFC1P60507 584 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 KLC3Q6P597 504 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 CRTC1Q6UUV9 634 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SCUBE3Q8IX30 993 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 CMTM8Q8IZV2 173 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF614Q8N883 585 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 RLN3Q8WXF3 142 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAF2Q96CS3 445 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 LRFN3Q9BTN0 628 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 CASS4Q9NQ75 786 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 COMMD8Q9NX08 183 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 KLQ9UEF7 1012 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 PRKAB1Q9Y478 270 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 EP300Q09472 2414 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 LRRC53A6NM62 1247 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 PMPCBO75439 489 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 UCHL3P15374 230 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ADSLP30566 484 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 CNR2P34972 360 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC12A3P55017 1021 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 EIF4HQ15056 248 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ELOCQ15369 112 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 NR0B2Q15466 257 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 KBTBD12Q3ZCT8 623 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MICALCLQ6ZW33 695 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MMGT1Q8N4V1 131 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC25A41Q8N5S1 370 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF366Q8N895 744 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 LPCAT1Q8NF37 534 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 BLOC1S5Q8TDH9 187 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 KRT35Q92764 455 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MAGOHBQ96A72 148 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 AGAP3Q96P47 875 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 RABGEF1Q9UJ41 708 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC6A14Q9UN76 642 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 AP4E1Q9UPM8 1137 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 EPN1Q9Y6I3 576 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 GVINP1Q7Z2Y8 2422 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 A0A1B0GVM2 712 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TLDC2A0PJX2 215 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TCAF2A6NFQ2 919 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 H3BUI4 141 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 TM7SF2O76062 418 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 LAIR1Q6GTX8 287 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 BEND7Q8N7W2 519 aaPredicted RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 PPHLN1Q8NEY8 458 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF606Q8WXB4 792 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 RUNDC3BQ96NL0 473 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 ACOX2Q99424 681 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 LPIN3Q9BQK8 851 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 CPEB1Q9BZB8 566 aaKnown RBP5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 MINDY3Q9H8M7 445 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 NT5MQ9NPB1 228 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 NCKIPSDQ9NZQ3 722 aa5.74□□□□□ -1.49
CDC42BPA-209ENST00000448940 UVRAGQ9P2Y5 699 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms