RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 NPAS4Q8IUM7 802 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ANKRD27Q96NW4 1050 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 VPS45Q9NRW7 570 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 TEX28O15482 410 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ASLP04424 464 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 BLVRAP53004 296 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 RPP38P78345 283 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 POU6F1Q14863 301 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ARID5BQ14865 1188 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 GJC2Q5T442 439 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 TFAP2DQ7Z6R9 452 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 RBFAQ8N0V3 343 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 LHX5Q9H2C1 402 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 KLHL3Q9UH77 587 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 COL1A1P02452 1464 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 MYH6P13533 1939 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 TBL1XO60907 577 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 NUP62P37198 522 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 BOP1Q14137 746 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 WSCD1Q658N2 575 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ZFP1Q6P2D0 407 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 LBX2Q6XYB7 198 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 TDRD5Q8NAT2 981 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PROX1Q92786 737 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ZC4H2Q9NQZ6 224 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 THAP1Q9NVV9 213 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 SORCS3Q9UPU3 1222 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 HEBP2Q9Y5Z4 205 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 TSPAN3O60637 253 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PDE9AO76083 593 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 GJB1P08034 283 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PTPN9P43378 593 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ATP6V0D1P61421 351 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PTAR1Q7Z6K3 402 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PHYKPLQ8IUZ5 450 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 WDR24Q96S15 920 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 CCT8L2Q96SF2 557 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 SH3GL3Q99963 347 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 AASDHPPTQ9NRN7 309 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 LTBP3Q9NS15 1303 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 COL6A1P12109 1028 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 LPOP22079 712 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 SLC16A1P53985 500 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 USP4Q13107 963 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 DGKZQ13574 1117 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 TRIM71Q2Q1W2 868 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 RAET1GQ6H3X3 334 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 IYDQ6PHW0 289 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 POTEHQ6S545 545 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 BNC2Q6ZN30 1099 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 IFNEQ86WN2 208 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 EID3Q8N140 333 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 RDH11Q8TC12 318 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 RACGAP1Q9H0H5 632 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ABCG4Q9H172 646 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PRDM8Q9NQV8 689 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 NR2E1Q9Y466 385 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PCDHB1Q9Y5F3 818 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 CHD2O14647 1828 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 B2RBV5 119 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 CCNT2O60583 730 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 FKBP6O75344 327 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ADRA1DP25100 572 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PRKCIP41743 596 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 MATKP42679 507 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 MAGEA10P43363 369 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 YBEYP58557 167 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 MTF1Q14872 753 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 CRY1Q16526 586 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 LSM12Q3MHD2 195 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 LRRC23Q53EV4 343 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 STXBP5Q5T5C0 1151 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PDE12Q6L8Q7 609 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 MIER2Q8N344 545 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 SETD9Q8NE22 299 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 CD101Q93033 1021 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PLD4Q96BZ4 506 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PAFAH2Q99487 392 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 IL1RAPL1Q9NZN1 696 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 SUCOQ9UBS9 1254 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 CAMTA1Q9Y6Y1 1673 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 UBDO15205 165 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ZNF185O15231 689 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 LGR5O75473 907 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 PGK1P00558 417 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 CCDC130P13994 396 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 RPL22P35268 128 aaKnown RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ACTN3Q08043 901 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 RFTN2Q52LD8 501 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-204ENST00000446349 EPC2Q52LR7 807 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 CDC73Q6P1J9 531 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 GJB7Q6PEY0 223 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 RD3Q7Z3Z2 195 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 C7orf57Q8NEG2 295 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 DENND1AQ8TEH3 1009 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 C12orf42Q96LP6 360 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 SYT17Q9BSW7 474 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 ARL15Q9NXU5 204 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 SH3BP4Q9P0V3 963 aa8.67□□□□□ -1.02
PTPN3-204ENST00000446349 A0A0G2JLL6 359 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms