RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 SLC46A1Q96NT5 459 aa15.21■□□□□ 0.03
UBE2F-216ENST00000445676 TRIM4Q9C037 500 aa15.21■□□□□ 0.03
UBE2F-216ENST00000445676 MIS12Q9H081 205 aa15.21■□□□□ 0.03
UBE2F-216ENST00000445676 PPM1HQ9ULR3 514 aa15.21■□□□□ 0.03
UBE2F-216ENST00000445676 LRRK2Q5S007 2527 aa15.21■□□□□ 0.03
UBE2F-216ENST00000445676 A0A1B0GVL5 298 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 A0A1W2PQU0 124 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 CDRT15L2A8MXV6 281 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 SCAMP1O15126 338 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 ATP9BO43861 1147 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 STX10O60499 249 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 FBXO21O94952 628 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 CALCAP01258 141 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 BRD2P25440 801 aaKnown RBP15.2■□□□□ 0.02
UBE2F-216ENST00000445676 VASPP50552 380 aaPredicted RBP15.2■□□□□ 0.02
UBE2F-216ENST00000445676 CLDN2P57739 230 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 SULT2A1Q06520 285 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 SRSF1Q07955 248 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBE2F-216ENST00000445676 SLC12A1Q13621 1099 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 ZNF284Q2VY69 593 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 EDRF1Q3B7T1 1238 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 ZC3H12AQ5D1E8 599 aaKnown RBP15.2■□□□□ 0.02
UBE2F-216ENST00000445676 ZNF542PQ5EBM4 170 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 ALG14Q96F25 216 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 HSFY1Q96LI6 401 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 ABCG4Q9H172 646 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 USP29Q9HBJ7 922 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 KIAA1257Q9ULG3 409 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 ENTPD2Q9Y5L3 495 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 UNC13CQ8NB66 2214 aa15.2■□□□□ 0.02
UBE2F-216ENST00000445676 MCF2LO15068 1137 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 ALOX15BO15296 676 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 APOEP02649 317 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 CTSLP07711 333 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 PAEPP09466 180 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 EPB41P11171 864 aaKnown RBP15.19■□□□□ 0.02
UBE2F-216ENST00000445676 HNRNPA2B1P22626 353 aaKnown RBP15.19■□□□□ 0.02
UBE2F-216ENST00000445676 RBMS1P29558 406 aaKnown RBP15.19■□□□□ 0.02
UBE2F-216ENST00000445676 AKT2P31751 481 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 DUSP3P51452 185 aaPredicted RBP15.19■□□□□ 0.02
UBE2F-216ENST00000445676 PLK1P53350 603 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 DPYDQ12882 1025 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 LRMPQ12912 555 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 NFATC3Q12968 1075 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 CLN3Q13286 438 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 ACCSLQ4AC99 568 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 DCAF17Q5H9S7 520 aaPredicted RBP15.19■□□□□ 0.02
UBE2F-216ENST00000445676 TCERG1LQ5VWI1 586 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 SYPL2Q5VXT5 272 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 GUSBP11Q6P575 273 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 TMEM270Q6UE05 265 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 ABI3BPQ7Z7G0 1075 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 EXD3Q8N9H8 876 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 OR52K2Q8NGK3 314 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 ERCC4Q92889 916 aaPredicted RBP15.19■□□□□ 0.02
UBE2F-216ENST00000445676 FAM149B1Q96BN6 582 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 BTN2A3PQ96KV6 586 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 PRMT1Q99873 361 aaKnown RBP15.19■□□□□ 0.02
UBE2F-216ENST00000445676 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 ZFR2Q9UPR6 939 aaKnown RBP15.19■□□□□ 0.02
UBE2F-216ENST00000445676 HPSEQ9Y251 543 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 PCDHGA8Q9Y5G5 932 aa15.19■□□□□ 0.02
UBE2F-216ENST00000445676 DOCK4Q8N1I0 1966 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 TCAF2A6NFQ2 919 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 F5H5T6 163 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 K7ELQ4 463 aaPredicted RBP15.18■□□□□ 0.02
UBE2F-216ENST00000445676 RNF225M0QZC1 329 aaPredicted RBP15.18■□□□□ 0.02
UBE2F-216ENST00000445676 F13A1P00488 732 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 IGLV3-25P01717 112 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
UBE2F-216ENST00000445676 PITX1P78337 314 aaPredicted RBP15.18■□□□□ 0.02
UBE2F-216ENST00000445676 CENPCQ03188 943 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 DLG2Q15700 870 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 CNGA2Q16280 664 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 CDKN3Q16667 212 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 OR6B2Q6IFH4 312 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 CCDC81Q6ZN84 652 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 HORMAD1Q86X24 394 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 ZNF548Q8NEK5 533 aaPredicted RBP15.18■□□□□ 0.02
UBE2F-216ENST00000445676 ARRDC3Q96B67 414 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 CCDC97Q96F63 343 aaPredicted RBP15.18■□□□□ 0.02
UBE2F-216ENST00000445676 DUSP23Q9BVJ7 150 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 GPR27Q9NS67 375 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 EVA1BQ9NVM1 165 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 DNAJC28Q9NX36 388 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 IL17BQ9UHF5 180 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 SLC25A13Q9UJS0 675 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 RCOR1Q9UKL0 485 aa15.18■□□□□ 0.02
UBE2F-216ENST00000445676 NEMP2A6NFY4 417 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 RNF103O00237 685 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 TERTO14746 1132 aaKnown RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 CETN3O15182 167 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 CASC3O15234 703 aaKnown RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 BNIP3LO60238 219 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 ZSCAN22P10073 491 aaPredicted RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 ZNF18P17022 549 aa15.17■□□□□ 0.02
UBE2F-216ENST00000445676 TBXAS1P24557 533 aaPredicted RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 RPL34P49207 117 aaKnown RBP15.17■□□□□ 0.02
UBE2F-216ENST00000445676 IRAK1P51617 712 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms