RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ABATP80404 500 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 LPCAT4Q643R3 524 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 NIPA1Q7RTP0 329 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 CLNKQ7Z7G1 428 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 TRABD2AQ86V40 505 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 FAM47BQ8NA70 645 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 BAP1Q92560 729 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 PDCD2LQ9BRP1 358 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 OSBPL6Q9BZF3 934 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 AGO4Q9HCK5 861 aaKnown RBP18.91■□□□□ 0.62
SHANK3-203ENST00000445220 KLHL1Q9NR64 748 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 BCL9O00512 1426 aa18.91■□□□□ 0.62
SHANK3-203ENST00000445220 GNG14A0A1W2PPG7 69 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 H3BN98 237 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 CYP1A1P04798 512 aaPredicted RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 ZSCAN5DPP0CG00 497 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 RAB25P57735 213 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 PUDPQ08623 228 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 STX4Q12846 297 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 ZNF268Q14587 947 aaPredicted RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 AADACL2Q6P093 401 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 PTAR1Q7Z6K3 402 aaPredicted RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 AMIGO2Q86SJ2 522 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 PXMP2Q9NR77 195 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 DDTLA6NHG4 134 aaPredicted RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 CHADO15335 359 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 CCNKO75909 580 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 LBPP18428 481 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 GTF2A2P52657 109 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 PTPN11Q06124 597 aaPredicted RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 ALYREFQ86V81 257 aaKnown RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 WDR49Q8IV35 697 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 ZNF540Q8NDQ6 660 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 ZNF606Q8WXB4 792 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 TPD52L3Q96J77 140 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 EPB41L4BQ9H329 900 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 CYP3A43Q9HB55 503 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 GIN1Q9NXP7 522 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 RAB26Q9ULW5 256 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 TELO2Q9Y4R8 837 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 ATP6V0D2Q8N8Y2 350 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 ACMSDQ8TDX5 336 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 NMRK2Q9NPI5 230 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 CCDC59Q9P031 241 aaKnown RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 INVSQ9Y283 1065 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 GMPPBQ9Y5P6 360 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 NCANO14594 1321 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 TMCC2O75069 709 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 PABPC1P11940 636 aaKnown RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 BCAT1P54687 386 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 CSNK2BP67870 215 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 SCARA3Q6AZY7 606 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 POLNQ7Z5Q5 900 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 DNERQ8NFT8 737 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 SYTL5Q8TDW5 730 aaPredicted RBP18.9■□□□□ 0.62
SHANK3-203ENST00000445220 CCNB1IP1Q9NPC3 277 aa18.9■□□□□ 0.62
SHANK3-203ENST00000445220 SEMA3DO95025 777 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 NPR3P17342 541 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 DNAJB2P25686 324 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 SHMT1P34896 483 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 GRIK3Q13003 919 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 POU6F1Q14863 301 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 ZFP69Q49AA0 526 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 ACOT1Q86TX2 421 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 SAPCD2Q86UD0 394 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 FBXO30Q8TB52 745 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 SNX8Q9Y5X2 465 aa18.89■□□□□ 0.62
SHANK3-203ENST00000445220 FAM86B2P0C5J1 330 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 VCLP18206 1134 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 PAICSP22234 425 aaKnown RBP18.89■□□□□ 0.61
SHANK3-203ENST00000445220 CHKAP35790 457 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 SEZ6Q53EL9 994 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 DNAJC14Q6Y2X3 702 aaPredicted RBP18.89■□□□□ 0.61
SHANK3-203ENST00000445220 OSBPL7Q9BZF2 842 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 ZNF221Q9UK13 617 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 SYNPO2Q9UMS6 1093 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 C17orf102A2RUQ5 167 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 HAT1O14929 419 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 ODC1P11926 461 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 ITGAXP20702 1163 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 TUBA4AP68366 448 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 SLCO6A1Q86UG4 719 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 ARHGEF28Q8N1W1 1705 aaKnown RBP18.89■□□□□ 0.61
SHANK3-203ENST00000445220 MYLPFQ96A32 169 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 TMEM176AQ96HP8 235 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 PNMA5Q96PV4 448 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 ACSS3Q9H6R3 686 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 PTPRHQ9HD43 1115 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 A0A087X1B8 175 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 HDAC3O15379 428 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 TM7SF2O76062 418 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 ZNF12P17014 697 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 HNRNPH3P31942 346 aaKnown RBP18.89■□□□□ 0.61
SHANK3-203ENST00000445220 ZNF544Q6NX49 715 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 HIPK1Q86Z02 1210 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 METTL6Q8TCB7 284 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 ZNF512Q96ME7 567 aaPredicted RBP18.89■□□□□ 0.61
SHANK3-203ENST00000445220 SLITRK1Q96PX8 696 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 PLA2G4CQ9UP65 541 aa18.89■□□□□ 0.61
SHANK3-203ENST00000445220 A0A0B4J269 797 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms