RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 LPCAT2Q7L5N7 544 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 NLRP14Q86W24 1093 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 TMPRSS6Q8IU80 811 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 ABCA7Q8IZY2 2146 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 NIPA2Q8N8Q9 360 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 OR7D4Q8NG98 312 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 PRCCQ92733 491 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-207ENST00000445181 SIPA1Q96FS4 1042 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 MKRN2Q9H000 416 aaKnown RBP24.54■■□□□ 1.52
C9orf3-207ENST00000445181 MTG2Q9H4K7 406 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 CATSPERBQ9H7T0 1116 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 ZWILCHQ9H900 591 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 PRSS16Q9NQE7 514 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 ZNF212Q9UDV6 495 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 MBD1Q9UIS9 605 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-207ENST00000445181 NEU3Q9UQ49 428 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 CKAP5Q14008 2032 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 EIF3CLB5ME19 914 aaKnown RBP24.53■■□□□ 1.52
C9orf3-207ENST00000445181 EEF2KO00418 725 aaKnown RBP24.53■■□□□ 1.52
C9orf3-207ENST00000445181 ZNF217O75362 1048 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 ACADMP11310 421 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 CDC25BP30305 580 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 GNA12Q03113 381 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 CA9Q16790 459 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 PPP6R3Q5H9R7 873 aaPredicted RBP24.53■■□□□ 1.52
C9orf3-207ENST00000445181 IL31Q6EBC2 164 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 TCEAL6Q6IPX3 200 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 DCAF4L2Q8NA75 395 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 SPC24Q8NBT2 197 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 TCEAL3Q969E4 200 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 EIF3CQ99613 913 aaKnown RBP24.53■■□□□ 1.52
C9orf3-207ENST00000445181 FBRSQ9HAH7 460 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 ATP13A1Q9HD20 1204 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 NDFIP2Q9NV92 336 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 LCMT1Q9UIC8 334 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 VPS51Q9UID3 782 aa24.53■■□□□ 1.52
C9orf3-207ENST00000445181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 EDDM13A0A1B0GTR0 161 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 CBX4O00257 560 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 FGF10O15520 208 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-207ENST00000445181 DAPK3O43293 454 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 SNAP91O60641 907 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 HTR7P34969 479 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 CYLC1P35663 651 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-207ENST00000445181 ETFBP38117 255 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 COPAP53621 1224 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 SEMA3BQ13214 749 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 SMTNL2Q2TAL5 461 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 BOLA3Q53S33 107 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 KCNT1Q5JUK3 1230 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 CYP2U1Q7Z449 544 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 PSTKQ8IV42 348 aaKnown RBP24.52■■□□□ 1.52
C9orf3-207ENST00000445181 TMEFF1Q8IYR6 380 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 CCDC170Q8IYT3 715 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 RTL3Q8N8U3 475 aaKnown RBP24.52■■□□□ 1.52
C9orf3-207ENST00000445181 HSPH1Q92598 858 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 KCTD15Q96SI1 283 aaPredicted RBP24.52■■□□□ 1.52
C9orf3-207ENST00000445181 PSMB7Q99436 277 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 CYP8B1Q9UNU6 501 aa24.52■■□□□ 1.52
C9orf3-207ENST00000445181 THADAQ6YHU6 1953 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 TARSL2A2RTX5 802 aaKnown RBP24.51■■□□□ 1.51
C9orf3-207ENST00000445181 GOLGA6L6A8MZA4 724 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 RAMP2O60895 175 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 RNASEH1O60930 286 aaKnown RBP24.51■■□□□ 1.51
C9orf3-207ENST00000445181 SIN3BO75182 1162 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 LIMK1P53667 647 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 SPA17Q15506 151 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 CYP4V2Q6ZWL3 525 aaPredicted RBP24.51■■□□□ 1.51
C9orf3-207ENST00000445181 ZNF354CQ86Y25 554 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 TMTC1Q8IUR5 882 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 ATP11CQ8NB49 1132 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 SLC35G2Q8TBE7 412 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 OSGEPQ9NPF4 335 aa24.51■■□□□ 1.51
C9orf3-207ENST00000445181 TMEM110-MUSTN1A8MSY1 372 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 TCF4P15884 667 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 IL1R2P27930 398 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 POLD3Q15054 466 aaPredicted RBP24.5■■□□□ 1.51
C9orf3-207ENST00000445181 HADHQ16836 314 aaKnown RBP24.5■■□□□ 1.51
C9orf3-207ENST00000445181 STPG1Q5TH74 334 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 RETSATQ6NUM9 610 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 LINGO4Q6UY18 593 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 ARMCX6Q7L4S7 300 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 RHOT2Q8IXI1 618 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 PIGKQ92643 395 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 MAGEH1Q9H213 219 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 LUC7LQ9NQ29 371 aaKnown RBP24.5■■□□□ 1.51
C9orf3-207ENST00000445181 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.5■■□□□ 1.51
C9orf3-207ENST00000445181 DONSONQ9NYP3 566 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 IMPACTQ9P2X3 320 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 INTUQ9ULD6 942 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 HPCAL4Q9UM19 191 aa24.5■■□□□ 1.51
C9orf3-207ENST00000445181 PROSCO94903 275 aa24.49■■□□□ 1.51
C9orf3-207ENST00000445181 GLDCP23378 1020 aa24.49■■□□□ 1.51
C9orf3-207ENST00000445181 ACVRL1P37023 503 aa24.49■■□□□ 1.51
C9orf3-207ENST00000445181 PTGER3P43115 390 aa24.49■■□□□ 1.51
C9orf3-207ENST00000445181 MAGEA1P43355 309 aa24.49■■□□□ 1.51
C9orf3-207ENST00000445181 VASPP50552 380 aaPredicted RBP24.49■■□□□ 1.51
C9orf3-207ENST00000445181 DLG2Q15700 870 aa24.49■■□□□ 1.51
C9orf3-207ENST00000445181 SPDYCQ5MJ68 293 aa24.49■■□□□ 1.51
C9orf3-207ENST00000445181 C9orf64Q5T6V5 341 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms