RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 FOXO6A8MYZ6 492 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZNF814B7Z6K7 855 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 PEX12O00623 359 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 MSI1O43347 362 aaKnown RBP4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 ANP32CO43423 234 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 TLX3O43711 291 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 HLA-DQA2P01906 255 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 LMO1P25800 156 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 GJC1P36383 396 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 STAT1P42224 750 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 VAMP2P63027 116 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 TRPC3Q13507 836 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 PKP1Q13835 747 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 GALNT3Q14435 633 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 IL13RA2Q14627 380 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 C10orf25Q5T742 122 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 MORN5Q5VZ52 161 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 AADACL2Q6P093 401 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 LRIG3Q6UXM1 1119 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 MMS22LQ6ZRQ5 1243 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 CYB5R4Q7L1T6 521 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 DDIASQ8IXT1 998 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 ESX1Q8N693 406 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 SETD9Q8NE22 299 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 NCSTNQ92542 709 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 HTRA1Q92743 480 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 EME1Q96AY2 570 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 CADM1Q9BY67 442 aaKnown RBP4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 HSF4Q9ULV5 492 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 SLC8A2Q9UPR5 921 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 ICKQ9UPZ9 632 aa4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P6-201ENST00000444896 WDR91A4D1P6 747 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 DPPA5A6NC42 116 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 DNAJC9-AS1A6NH13 148 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 F8W810 466 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 RHODO00212 210 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 PRPF4O43172 522 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 CCNT1O60563 726 aaKnown RBP4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 TOP3BO95985 862 aaKnown RBP4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 WEE2P0C1S8 567 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 CYP19A1P11511 503 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 CD72P21854 359 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 KLRC2P26717 231 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 CHRNA5P30532 468 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 CIITAP33076 1130 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 PTPN9P43378 593 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 KLF9Q13886 244 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 SMTNL2Q2TAL5 461 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 FBXO43Q4G163 708 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 PIK3CD-AS1Q5SR53 167 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 SLC9C2Q5TAH2 1124 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 FAM171A1Q5VUB5 890 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 ISM2Q6H9L7 571 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 RETSATQ6NUM9 610 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 GJB7Q6PEY0 223 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 SCAIQ8N9R8 606 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 PRSS3P2Q8NHM4 247 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 C16orf52Q8NHV5 167 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 CUL5Q93034 780 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 CLMNQ96JQ2 1002 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 TUBB6Q9BUF5 446 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 SPRTNQ9H040 489 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 LMAN2LQ9H0V9 348 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 AAMDCQ9H7C9 122 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 SLC13A4Q9UKG4 626 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 ZMYM2Q9UBW7 1377 aa4.91□□□□□ -1.62
HMGB3P6-201ENST00000444896 MST1RQ04912 1400 aa4.9□□□□□ -1.62
HMGB3P6-201ENST00000444896 WRNQ14191 1432 aaPredicted RBP eCLIP4.9□□□□□ -1.62
HMGB3P6-201ENST00000444896 PCSK5Q92824 1860 aa4.9□□□□□ -1.62
HMGB3P6-201ENST00000444896 TRBV5-7A0A0A0MS05 114 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 TARSL2A2RTX5 802 aaKnown RBP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 ATG13O75143 517 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 LCKP06239 509 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 HNRNPA1P09651 372 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 CYP2J2P51589 502 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 PMPCAQ10713 525 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 TBL3Q12788 808 aaKnown RBP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 MAPK7Q13164 816 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 MTX1Q13505 466 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 C5orf22Q49AR2 442 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 INTS11Q5TA45 600 aaKnown RBP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZNF793Q6ZN11 406 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 HEATR4Q86WZ0 1026 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 ZBTB10Q96DT7 871 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 FRG2BQ96QU4 278 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 WDR83Q9BRX9 315 aaKnown RBP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 NPLQ9BXD5 320 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 HIPK3Q9H422 1215 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 MROH8Q9H579 483 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 TTC12Q9H892 705 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 THSD1Q9NS62 852 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 NLKQ9UBE8 527 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 HEY2Q9UBP5 337 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 OSGIN2Q9Y236 505 aa4.9□□□□□ -1.63
HMGB3P6-201ENST00000444896 HMGXB3Q12766 1538 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms