RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 HNF1BP35680 557 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 CXCR3P49682 368 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 PPP2CBP62714 309 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 PPP2CAP67775 309 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 STAT4Q14765 748 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 SLC25A52Q3SY17 297 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 POM121L1PQ3SYA9 428 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 CT47A1Q5JQC4 288 aaPredicted RBP12.08□□□□□ -0.48
TTC28-203ENST00000442232 MIIPQ5JXC2 388 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 TMPRSS7Q7RTY8 843 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 SETD3Q86TU7 594 aaPredicted RBP12.08□□□□□ -0.48
TTC28-203ENST00000442232 PROSER1Q86XN7 944 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 PGAP3Q96FM1 320 aaPredicted RBP12.08□□□□□ -0.48
TTC28-203ENST00000442232 PPP1R16AQ96I34 528 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 TBCBQ99426 244 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 NPY6RQ99463 290 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 PREBQ9HCU5 417 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 ARHGEF38Q9NXL2 777 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 TBC1D30Q9Y2I9 924 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 FHOD1Q9Y613 1164 aa12.08□□□□□ -0.48
TTC28-203ENST00000442232 GOLGA4Q13439 2230 aaKnown RBP12.07□□□□□ -0.48
TTC28-203ENST00000442232 TLR4O00206 839 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 PLK4O00444 970 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 KPNA3O00505 521 aaPredicted RBP12.07□□□□□ -0.48
TTC28-203ENST00000442232 ENC1O14682 589 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 MCF2LO15068 1137 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 LATO43561 262 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 LDOC1O95751 146 aaPredicted RBP12.07□□□□□ -0.48
TTC28-203ENST00000442232 PRNPP04156 253 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 WNT1P04628 370 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 CDK4P11802 303 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 SRCP12931 536 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 UCHL3P15374 230 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 EPHA8P29322 1005 aaPredicted RBP12.07□□□□□ -0.48
TTC28-203ENST00000442232 OR1E1P30953 314 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 CDH5P33151 784 aaPredicted RBP12.07□□□□□ -0.48
TTC28-203ENST00000442232 GABRB2P47870 512 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 IRAK1P51617 712 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 CLCN6P51797 869 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 NXPH1P58417 271 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 CNTN1Q12860 1018 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 OVGP1Q12889 678 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 C5orf22Q49AR2 442 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 HS1BP3Q53T59 392 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 KCNT1Q5JUK3 1230 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 FKBP15Q5T1M5 1219 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 TFAP2DQ7Z6R9 452 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 C14orf80Q86SX3 495 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 IQCHQ86VS3 1027 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 TRIM69Q86WT6 500 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 ZNF677Q86XU0 584 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 XYLT1Q86Y38 959 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 GATAD2AQ86YP4 633 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 MFSD2AQ8NA29 543 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 DCAF4L2Q8NA75 395 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 CNDP2Q96KP4 475 aaKnown RBP12.07□□□□□ -0.48
TTC28-203ENST00000442232 STK33Q9BYT3 514 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 EBF2Q9HAK2 575 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 TOR4AQ9NXH8 423 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 PPM1HQ9ULR3 514 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 LHX6Q9UPM6 363 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 HS3ST2Q9Y278 367 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 ASPMQ8IZT6 3477 aa12.07□□□□□ -0.48
TTC28-203ENST00000442232 CFAP47Q6ZTR5 3102 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 A0A1W2PR77 199 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 FAM170AA1A519 330 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 E9PAM4 449 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 F8VZ95 297 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 PRAMEF26H0Y7S4 382 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 SRGAP2O75044 1071 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 RFPL3O75679 317 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 CNTN5O94779 1100 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 CHRNA3P32297 505 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 ARL13BQ3SXY8 428 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 ALFQ53S48 1182 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 TCP11X2Q5H9J9 407 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 PRAMEF14Q5SWL7 426 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 AGBL4Q5VU57 503 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 OTUD1Q5VV17 481 aaPredicted RBP12.06□□□□□ -0.48
TTC28-203ENST00000442232 NAA35Q5VZE5 725 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 RETSATQ6NUM9 610 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 C22orf39Q6P5X5 142 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 ZNF783Q6ZMS7 281 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 EID2Q8N6I1 236 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 ANKRD20A12PQ8NF67 263 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 OR52K2Q8NGK3 314 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 ALG14Q96F25 216 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 C1orf74Q96LT6 269 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 HAPLN3Q96S86 360 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 SPON2Q9BUD6 331 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 ERVMER34-1Q9H9K5 563 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 SAMSN1Q9NSI8 373 aaKnown RBP12.06□□□□□ -0.48
TTC28-203ENST00000442232 TAB2Q9NYJ8 693 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 MPP6Q9NZW5 540 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 VPS51Q9UID3 782 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 SARDHQ9UL12 918 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 OR51B4Q9Y5P0 310 aa12.06□□□□□ -0.48
TTC28-203ENST00000442232 ILVBLA1L0T0 632 aa12.05□□□□□ -0.48
TTC28-203ENST00000442232 CBX4O00257 560 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms