RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 TREML2Q5T2D2 321 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 GARNL3Q5VVW2 1013 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 SP5Q6BEB4 398 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 MTFR2Q6P444 385 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMEM81Q6P7N7 255 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 IL27RAQ6UWB1 636 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ATG14Q6ZNE5 492 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 CEP97Q8IW35 865 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 JAKMIP1Q96N16 626 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ABHD1Q96SE0 405 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 GPR87Q9BY21 358 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 TRIM31Q9BZY9 425 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 TTC12Q9H892 705 aaPredicted RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZWILCHQ9H900 591 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 POLR1BQ9H9Y6 1135 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 GRPEL1Q9HAV7 217 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 MORF4L1Q9UBU8 362 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 PA2G4Q9UQ80 394 aaKnown RBP4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 FPGT-TNNI3KV9GXZ4 949 aa4.33□□□□□ -1.72
CDC42BPA-207ENST00000441725 ERCC6L2Q5T890 1561 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 GPRASP1Q5JY77 1395 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 DISP3Q9P2K9 1392 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 A0A1W2PQF6 199 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 AHRRA9YTQ3 701 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 BTBD18B2RXH4 712 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 AP4M1O00189 453 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 BCAT2O15382 392 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 PRAMEF2O60811 474 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 KRT1P04264 644 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 TPM3P06753 285 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 C1SP09871 688 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMIGD3P0DMS9 266 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 IGFBP2P18065 325 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 TNNT3P45378 269 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 MTNR1AP48039 350 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 VAV2P52735 878 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 EFNA5P52803 228 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 EPHB4P54760 987 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 CDH8P55286 799 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 PPARDQ03181 441 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 CEBPZQ03701 1054 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 ABHD18Q0P651 414 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 GXYLT1Q4G148 440 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 GKAP1Q5VSY0 366 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 TCTN3Q6NUS6 607 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 CRELD2Q6UXH1 353 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 RRM2BQ7LG56 351 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 RNF144BQ7Z419 303 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 TMPRSS6Q8IU80 811 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 CADM4Q8NFZ8 388 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 C2CD4CQ8TF44 421 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 LPIN2Q92539 896 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 SPATA17Q96L03 361 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 ALOXE3Q9BYJ1 711 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 MRPL15Q9P015 296 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 C5AR2Q9P296 337 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 SUCLA2Q9P2R7 463 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 SEL1LQ9UBV2 794 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 N6AMT1Q9Y5N5 214 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC30A1Q9Y6M5 507 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 CAPN7Q9Y6W3 813 aa4.32□□□□□ -1.72
CDC42BPA-207ENST00000441725 TRGV11A0A075B6L2 103 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 MARCH11A6NNE9 402 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 C17orf100A8MU93 164 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 CAPN14A8MX76 684 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 CPLX1O14810 134 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC16A3O15427 465 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 TBX10O75333 385 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 TACC1O75410 805 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 RAD17O75943 681 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 CCDC172P0C7W6 258 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ZNF853P0CG23 659 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ITPKBP27987 946 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 CPOXP36551 454 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 RPS6KA3P51812 740 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 FAM189BP81408 668 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 E2F1Q01094 437 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 IL13RA2Q14627 380 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 CRYMQ14894 314 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ASIC2Q16515 512 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLC18A3Q16572 532 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 FBXO43Q4G163 708 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SLFN13Q68D06 897 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 GJB7Q6PEY0 223 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 MFSD6Q6ZSS7 791 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 GPR149Q86SP6 731 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ANKRD35Q8N283 1001 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 ENDOVQ8N8Q3 282 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 B3GALNT2Q8NCR0 500 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 TOR1AIP2Q8NFQ8 470 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 OR8H1Q8NGG4 311 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 MYCBPAPQ8TBZ2 947 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 NPLQ9BXD5 320 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 EDEM3Q9BZQ6 932 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 RABEP2Q9H5N1 569 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 RPAP3Q9H6T3 665 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 SH2D4AQ9H788 454 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 PDRG1Q9NUG6 133 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 DECR2Q9NUI1 292 aa4.31□□□□□ -1.72
CDC42BPA-207ENST00000441725 IL1RAPL1Q9NZN1 696 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms