RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 MAST2Q6P0Q8 1798 aa3.74□□□□□ -1.81
HMGB3P11-201ENST00000440127 A0A087WV62 115 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 IGKV6D-41A0A0C4DH26 115 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 ESYT2A0FGR8 921 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MANSC4A6NHS7 340 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 LRRC14BA6NHZ5 514 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 RHPN2P1A8MT19 583 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 TMEM232C9JQI7 657 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYO1CO00159 1063 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 ADAMTS3O15072 1205 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZSCAN12O43309 604 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CTIFO43310 598 aaKnown RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 STX10O60499 249 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCNT1O60563 726 aaKnown RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 RPN1P04843 607 aaKnown RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 HNRNPCP07910 306 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 DLDP09622 509 aaKnown RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PIM1P11309 404 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CYP2C9P11712 490 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 TYRP14679 529 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 BDNFP23560 247 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CHKAP35790 457 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PRPHP41219 470 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 UBA7P41226 1012 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 STAT6P42226 847 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 STX17P56962 302 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 NKX6-1P78426 367 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CUL4BQ13620 913 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MAPRE1Q15691 268 aaKnown RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLC35G1Q2M3R5 365 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 ASPRV1Q53RT3 343 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 HSP90AA4PQ58FG1 418 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF658Q5TYW1 1059 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 SPECC1LQ69YQ0 1117 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 KLHL10Q6JEL2 608 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC70Q6NSX1 233 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MTHFD1LQ6UB35 978 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PPP1R32Q7Z5V6 425 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PCGF5Q86SE9 256 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 NEK8Q86SG6 692 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 ZNF354CQ86Y25 554 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PAF1Q8N7H5 531 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 RNF152Q8N8N0 203 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 ANKRD20A12PQ8NF67 263 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 RASSF8Q8NHQ8 419 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 IL31RAQ8NI17 732 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 KIF18AQ8NI77 898 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 STAMQ92783 540 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 TEKT1Q969V4 418 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC47Q96A33 483 aaKnown RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MASTLQ96GX5 879 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PPP1R13BQ96KQ4 1090 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCDC17Q96LX7 622 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 AK8Q96MA6 479 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PIGSQ96S52 555 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 BAG1Q99933 345 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 AMBRA1Q9C0C7 1298 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CCSER1Q9C0I3 900 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 LRRC27Q9C0I9 530 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 BLZF1Q9H2G9 400 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MRPL46Q9H2W6 279 aaKnown RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 CUEDC2Q9H467 287 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MAGEF1Q9HAY2 307 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 VAT1LQ9HCJ6 419 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 AGO4Q9HCK5 861 aaKnown RBP3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 STARD7Q9NQZ5 370 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PNPOQ9NVS9 261 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MTMR4Q9NYA4 1195 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 RWDD2AQ9UIY3 292 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 LRCH1Q9Y2L9 728 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 GPR52Q9Y2T5 361 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 PLEKHM1Q9Y4G2 1056 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 TAF1P21675 1872 aa3.73□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYO3BQ8WXR4 1341 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 SYNRGQ9UMZ2 1314 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 DLEC1Q9Y238 1755 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 GOLGA6L9A6NEM1 432 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 DNAJC9-AS1A6NH13 148 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 TARM1B6A8C7 271 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 AKR1B15C9JRZ8 316 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 H0YIN7 160 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 H3BUI4 141 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 MYO1FO00160 1098 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 FOXN3O00409 490 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 MPHOSPH10O00566 681 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PHGDHO43175 533 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 VPS4BO75351 444 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 KIF20AO95235 890 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 SLU7O95391 586 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 RHOP08100 348 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 MMP10P09238 476 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 TPM1P09493 284 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 FAM163BP0C2L3 166 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 OR52Z1P0C646 297 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 SNHG28P0DPA3 235 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 PDHBP11177 359 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 AKR1B1P15121 316 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 RPL17P18621 184 aaKnown RBP3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 CASP1P29466 404 aa3.72□□□□□ -1.81
HMGB3P11-201ENST00000440127 CDC25AP30304 524 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms