RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 UNGP13051 313 aaPredicted RBP20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 RECQLP46063 649 aaPredicted RBP20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 ADPRHP54922 357 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 HLA-BQ31612 363 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 POM121L1PQ3SYA9 428 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 DNAJC24Q6P3W2 148 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 LAYNQ6UX15 382 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 PIP4P1Q86T03 277 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 DRC7Q8IY82 874 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 JOSD2Q8TAC2 188 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 FRS2Q8WU20 508 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 SKA1Q96BD8 255 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 ALG14Q96F25 216 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 PCDHB18PQ96TA0 734 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 AGPAT1Q99943 283 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 BPIFA3Q9BQP9 254 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 ACE2Q9BYF1 805 aaPredicted RBP20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 AASDHPPTQ9NRN7 309 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 ADAMTS1Q9UHI8 967 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 OR51B4Q9Y5P0 310 aa20.35■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3DA0A087WVF3 549 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3IA0A087WXS9 549 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3EA0A087X179 549 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3KA0A087X1G2 549 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3FA6NER0 549 aaPredicted RBP20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 LRRC10BA6NIK2 292 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 DRGXA6NNA5 263 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3LB9A6J9 549 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 ALOX15BO15296 676 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 SH3BP5O60239 455 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 IGHV4-34P06331 123 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3HP0C7X1 549 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 CD59P13987 128 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 GPD1P21695 349 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 VASPP50552 380 aaPredicted RBP20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 SHC2P98077 582 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 KIF19Q2TAC6 998 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 CCDC14Q49A88 953 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3GQ6DHY5 549 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3CQ6IPX1 549 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 PHF13Q86YI8 300 aaPredicted RBP20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 ZNF683Q8IZ20 524 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TBC1D3Q8IZP1 549 aaPredicted RBP20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 C3orf20Q8ND61 904 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 FAM172AQ8WUF8 416 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 HSD3B7Q9H2F3 369 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 IL21RQ9HBE5 538 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 ATP13A1Q9HD20 1204 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 OSGEPQ9NPF4 335 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 DYRK4Q9NR20 520 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 TM7SF3Q9NS93 570 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 HS3ST2Q9Y278 367 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 FNDC3AQ9Y2H6 1198 aaKnown RBP20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 SLCO1B1Q9Y6L6 691 aa20.34■□□□□ 0.85
SHROOM1-204ENST00000440118 CABIN1Q9Y6J0 2220 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 IGLV3-10A0A075B6K4 115 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 A0A0D9SEW6 157 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 C2CD4BA6NLJ0 364 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 SRCP12931 536 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 RRM1P23921 792 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 PTPN9P43378 593 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 ZNF165P49910 485 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 CLCN6P51797 869 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 RACK1P63244 317 aaKnown RBP20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 RETSATQ6NUM9 610 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 LINGO4Q6UY18 593 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 ZNF783Q6ZMS7 281 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 STRADAQ7RTN6 431 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 APTXQ7Z2E3 356 aaKnown RBP20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 OR7D4Q8NG98 312 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 C1orf216Q8TAB5 229 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 PIP4K2CQ8TBX8 421 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 SLC6A18Q96N87 628 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 PSMB7Q99436 277 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 OR12D3Q9UGF7 316 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 TPX2Q9ULW0 747 aaKnown RBP20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 ANKRD6Q9Y2G4 727 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 SNX11Q9Y5W9 270 aa20.33■□□□□ 0.85
SHROOM1-204ENST00000440118 CACNA1BQ00975 2339 aa20.33■□□□□ 0.84
SHROOM1-204ENST00000440118 A0A1W2PPC4 97 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 ILVBLA1L0T0 632 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 PLK4O00444 970 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 KPNA3O00505 521 aaPredicted RBP20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 MCF2LO15068 1137 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 SLC7A4O43246 635 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 GJB3O75712 270 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 ADRA1BP35368 520 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 ETFBP38117 255 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 TPM4P67936 248 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 C1QBPQ07021 282 aaKnown RBP20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 SUZ12Q15022 739 aaKnown RBP20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 SLC45A4Q5BKX6 768 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 C22orf39Q6P5X5 142 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 DCUN1D2Q6PH85 259 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 BNIPLQ7Z465 357 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 GRIN3AQ8TCU5 1115 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 CAMK1GQ96NX5 476 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 MCEEQ96PE7 176 aa20.32■□□□□ 0.84
SHROOM1-204ENST00000440118 PPARGC1AQ9UBK2 798 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms