RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 PRPSAP1Q14558 356 aa20.09■□□□□ 0.81
APTR-204ENST00000440088 TTC39BQ5VTQ0 682 aaPredicted RBP20.09■□□□□ 0.81
APTR-204ENST00000440088 CAPN12Q6ZSI9 719 aa20.09■□□□□ 0.81
APTR-204ENST00000440088 EPS8L3Q8TE67 593 aaKnown RBP20.09■□□□□ 0.81
APTR-204ENST00000440088 MAML1Q92585 1016 aa20.09■□□□□ 0.81
APTR-204ENST00000440088 SP110Q9HB58 689 aa20.09■□□□□ 0.81
APTR-204ENST00000440088 BCCIPQ9P287 314 aaKnown RBP eCLIP20.09■□□□□ 0.81
APTR-204ENST00000440088 LSM7Q9UK45 103 aaKnown RBP20.09■□□□□ 0.81
APTR-204ENST00000440088 A0A1B0GVM2 712 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 TCAF2A6NFQ2 919 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 SMIM23A6NLE4 172 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 PER2O15055 1255 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 GREM1O60565 184 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 AP2A1O95782 977 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 GRIA1P42261 906 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 RENBPP51606 427 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 GPX6P59796 221 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 SERINC3Q13530 473 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 LONRF1Q17RB8 773 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 STXBP5Q5T5C0 1151 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 AGBL2Q5U5Z8 902 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 LRRC8BQ6P9F7 803 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 Q6ZNB5 142 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 C3orf62Q6ZUJ4 267 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 CHST9Q7L1S5 443 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 PGM2Q96G03 612 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 GORASP1Q9BQQ3 440 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 PBX4Q9BYU1 374 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 RBM22Q9NW64 420 aaKnown RBP eCLIP20.08■□□□□ 0.8
APTR-204ENST00000440088 DOCK6Q96HP0 2047 aa20.08■□□□□ 0.8
APTR-204ENST00000440088 CCR2P41597 374 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 ELMSAN1Q6PJG2 1045 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 IGDCC3Q8IVU1 814 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 LEMD2Q8NC56 503 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 NSMCE1Q8WV22 266 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 SLC46A2Q9BY10 475 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 MAGEH1Q9H213 219 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 CERS4Q9HA82 394 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 DNMT3BQ9UBC3 853 aaKnown RBP20.07■□□□□ 0.8
APTR-204ENST00000440088 TTLL3Q9Y4R7 772 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 HCFC2Q9Y5Z7 792 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.07■□□□□ 0.8
APTR-204ENST00000440088 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.07■□□□□ 0.8
APTR-204ENST00000440088 J3KR12 359 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 CACNG3O60359 315 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 TSPAN3O60637 253 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 SUN1O94901 812 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 PEX11BO96011 259 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 RHOP08100 348 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 DDX6P26196 483 aaKnown RBP eCLIP20.07■□□□□ 0.8
APTR-204ENST00000440088 SSTR1P30872 391 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 SLCO1A2P46721 670 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 IL10RBQ08334 325 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 RBM23Q86U06 439 aaKnown RBP20.07■□□□□ 0.8
APTR-204ENST00000440088 AGGF1Q8N302 714 aaeCLIP20.07■□□□□ 0.8
APTR-204ENST00000440088 FAM76AQ8TAV0 307 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 SHKBP1Q8TBC3 707 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 PABPC5Q96DU9 382 aaKnown RBP20.07■□□□□ 0.8
APTR-204ENST00000440088 ZNF419Q96HQ0 510 aaPredicted RBP20.07■□□□□ 0.8
APTR-204ENST00000440088 PPP1R2P1Q96PQ5 205 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 ZDHHC7Q9NXF8 308 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 ZNF510Q9Y2H8 683 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 SH3BP1Q9Y3L3 701 aa20.07■□□□□ 0.8
APTR-204ENST00000440088 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.06■□□□□ 0.8
APTR-204ENST00000440088 EXOC1LA0A1B0GW35 172 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 NRG2O14511 850 aaPredicted RBP20.06■□□□□ 0.8
APTR-204ENST00000440088 RGS16O15492 202 aaPredicted RBP20.06■□□□□ 0.8
APTR-204ENST00000440088 SPAG6O75602 509 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 SGSHP51688 502 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 GNA12Q03113 381 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 ZNF177Q13360 481 aaPredicted RBP20.06■□□□□ 0.8
APTR-204ENST00000440088 MARC1Q5VT66 337 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 KCTD11Q693B1 232 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 OTOP3Q7RTS5 596 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 SETD3Q86TU7 594 aaPredicted RBP20.06■□□□□ 0.8
APTR-204ENST00000440088 SH2D3CQ8N5H7 860 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 TTC16Q8NEE8 873 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 FCRL5Q96RD9 977 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 GLOD4Q9HC38 313 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 MSRAQ9UJ68 235 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 AAR2Q9Y312 384 aaKnown RBP20.06■□□□□ 0.8
APTR-204ENST00000440088 CHD5Q8TDI0 1954 aa20.06■□□□□ 0.8
APTR-204ENST00000440088 TYW5A2RUC4 315 aaKnown RBP20.05■□□□□ 0.8
APTR-204ENST00000440088 PSMD3O43242 534 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 HLA-DQB2P05538 268 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 ACVRL1P37023 503 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 IFNAR2P48551 515 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 ARHGAP15Q53QZ3 475 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 GPR158Q5T848 1215 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 HTR3DQ70Z44 454 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 ARHGEF2Q92974 986 aaKnown RBP20.05■□□□□ 0.8
APTR-204ENST00000440088 TCEAL4Q96EI5 215 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 SIGLEC10Q96LC7 697 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 MLPHQ9BV36 600 aaPredicted RBP20.05■□□□□ 0.8
APTR-204ENST00000440088 LRRC40Q9H9A6 602 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 CFAP97Q9P2B7 532 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 ZC3H7BQ9UGR2 993 aaKnown RBP20.05■□□□□ 0.8
APTR-204ENST00000440088 CDH23Q9H251 3354 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 ILVBLA1L0T0 632 aa20.05■□□□□ 0.8
APTR-204ENST00000440088 SCAMP3O14828 347 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms