RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 PLD1Q13393 1074 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 PPIGQ13427 754 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■■■□□ 15.4
IFT140-204ENST00000439987 OLIG2Q13516 323 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 MPP2Q14168 576 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 CRYMQ14894 314 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 CCNJLQ8IV13 435 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 FIBCD1Q8N539 461 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 ARNTL2Q8WYA1 636 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 ZNF212Q9UDV6 495 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 IPO11Q9UI26 975 aaKnown RBP15.24■□□□□ 0.03
IFT140-204ENST00000439987 MAFFQ9ULX9 164 aa15.24■□□□□ 0.03
IFT140-204ENST00000439987 USP12O75317 370 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 INHBAP08476 426 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 LINC00271P0C7V0 271 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 TACR2P21452 398 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 SLC8A1P32418 973 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 PRPSAP1Q14558 356 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 STEAP4Q687X5 459 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 OTOP3Q7RTS5 596 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 UBE2Q1Q7Z7E8 422 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 LRRC6Q86X45 466 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 PARP9Q8IXQ6 854 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 OR52K1Q8NGK4 314 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 N4BP2L2Q92802 583 aaPredicted RBP15.23■□□□□ 0.03
IFT140-204ENST00000439987 NAT9Q9BTE0 207 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 KIF9Q9HAQ2 790 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 PRKAG2Q9UGJ0 569 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 INSL5Q9Y5Q6 135 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 GMNCA6NCL1 334 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 HARS2P49590 506 aaKnown RBP15.23■□□□□ 0.03
IFT140-204ENST00000439987 SATB1Q01826 763 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 CREMQ03060 361 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 CYS1Q717R9 158 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 DNAJB7Q7Z6W7 309 aaPredicted RBP15.23■□□□□ 0.03
IFT140-204ENST00000439987 CTAGE3PQ8IX95 158 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 KLHDC8BQ8IXV7 354 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 MZB1Q8WU39 189 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 BADQ92934 168 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 HMCESQ96FZ2 354 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 OXNAD1Q96HP4 312 aaPredicted RBP15.23■□□□□ 0.03
IFT140-204ENST00000439987 SMC6Q96SB8 1091 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 LRRC40Q9H9A6 602 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 RXFP1Q9HBX9 757 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 CASS4Q9NQ75 786 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 SYBUQ9NX95 663 aa15.23■□□□□ 0.03
IFT140-204ENST00000439987 A0A1W2PPM1 405 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 ACSL4O60488 711 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 CTSAP10619 480 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 PGAM1P18669 254 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 PPP3CCP48454 512 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 EPHB3P54753 998 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 FPGSQ05932 587 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 ANO4Q32M45 955 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 TRMT10BQ6PF06 316 aaKnown RBP15.22■□□□□ 0.03
IFT140-204ENST00000439987 SLC26A11Q86WA9 606 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 PPM1NQ8N819 430 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 ANKRD42Q8N9B4 389 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 MYEOVQ96EZ4 313 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 SGSM3Q96HU1 749 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 ZBED2Q9BTP6 218 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 MOCS1Q9NZB8 636 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 UBP1Q9NZI7 540 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 IQANK1A0A1B0GTG1 560 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 FAM159BA6NKW6 160 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 CXorf49A8MYA2 514 aaPredicted RBP15.22■□□□□ 0.03
IFT140-204ENST00000439987 F5H5T6 163 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 CALRP27797 417 aaKnown RBP15.22■□□□□ 0.03
IFT140-204ENST00000439987 SLC11A2P49281 568 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 CIR1Q86X95 450 aaPredicted RBP15.22■□□□□ 0.03
IFT140-204ENST00000439987 DNAAF3Q8N9W5 541 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 MGARPQ8TDB4 240 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 CLP1Q92989 425 aaKnown RBP15.22■□□□□ 0.03
IFT140-204ENST00000439987 FATE1Q969F0 183 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 PSMG2Q969U7 264 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 PLD4Q96BZ4 506 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 FCRL5Q96RD9 977 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 CCDC134Q9H6E4 229 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 GLOD4Q9HC38 313 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 SMYD2Q9NRG4 433 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 RBM22Q9NW64 420 aaKnown RBP eCLIP15.22■□□□□ 0.037e-7■■■■■ 27.3
IFT140-204ENST00000439987 CXXC1Q9P0U4 656 aaPredicted RBP15.22■□□□□ 0.03
IFT140-204ENST00000439987 UXTQ9UBK9 157 aaPredicted RBP15.22■□□□□ 0.03
IFT140-204ENST00000439987 AAR2Q9Y312 384 aaKnown RBP15.22■□□□□ 0.03
IFT140-204ENST00000439987 INSL6Q9Y581 213 aa15.22■□□□□ 0.03
IFT140-204ENST00000439987 FAM47DPA6NHR8 397 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 PRPF4O43172 522 aaKnown RBP eCLIP15.21■□□□□ 0.03
IFT140-204ENST00000439987 PSMD3O43242 534 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 ALDH1A2O94788 518 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 OAS1P00973 400 aaKnown RBP15.21■□□□□ 0.03
IFT140-204ENST00000439987 HLA-DQB2P05538 268 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 HSPA1AP0DMV8 641 aaKnown RBP15.21■□□□□ 0.03
IFT140-204ENST00000439987 HSPA1BP0DMV9 641 aaKnown RBP15.21■□□□□ 0.03
IFT140-204ENST00000439987 LRRC14Q15048 493 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 C5orf22Q49AR2 442 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 FAM133BQ5BKY9 247 aaKnown RBP15.21■□□□□ 0.03
IFT140-204ENST00000439987 NAPEPLDQ6IQ20 393 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 CYB5D1Q6P9G0 228 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 LGI2Q8N0V4 545 aa15.21■□□□□ 0.03
IFT140-204ENST00000439987 C4orf33Q8N1A6 199 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms