RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 GAB1Q13480 694 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 KCNJ12Q14500 433 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 PTGR1Q14914 329 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 KIAA0753Q2KHM9 967 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 DARS2Q6PI48 645 aaKnown RBP3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 SKAP1Q86WV1 359 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 DCP1BQ8IZD4 617 aaKnown RBP3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 AKAP1Q92667 903 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 TTLL2Q9BWV7 592 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 AS3MTQ9HBK9 375 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 THSD1Q9NS62 852 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 ANAPC4Q9UJX5 808 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 ICKQ9UPZ9 632 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 PCDHB2Q9Y5E7 798 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 NOTCH4Q99466 2003 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 MON2Q7Z3U7 1717 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 ANKRD26Q9UPS8 1709 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 SBNO1A3KN83 1393 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 CASKIN1Q8WXD9 1431 aa3.35□□□□□ -1.87
HMGB1P18-201ENST00000438801 IGF2RP11717 2491 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 STAB1Q9NY15 2570 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 FLNCQ14315 2725 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 HRGP04196 525 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 PLA2G2AP14555 144 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 HOXB2P14652 356 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 PEX2P28328 305 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 NDUFS1P28331 727 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 ARRB2P32121 409 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 IGHMBP2P38935 993 aaKnown RBP3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 FAM193AP78312 1265 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 NUGGCQ68CJ6 796 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 PPP4R4Q6NUP7 873 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 Q6ZTC4 211 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 RNF44Q7L0R7 432 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 TRAPPC11Q7Z392 1133 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 SRGAP1Q7Z6B7 1085 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 RFX6Q8HWS3 928 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 RAVER1Q8IY67 606 aaKnown RBP3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 MAGEB6Q8N7X4 407 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 KAT2BQ92831 832 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 GJA10Q969M2 543 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 WDR24Q96S15 920 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 FZD3Q9NPG1 666 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 HEYLQ9NQ87 328 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 DDX20Q9UHI6 824 aaKnown RBP3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 WNK3Q9BYP7 1800 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 ZNF541Q9H0D2 1346 aa3.34□□□□□ -1.87
HMGB1P18-201ENST00000438801 INSRP06213 1382 aa3.34□□□□□ -1.88
HMGB1P18-201ENST00000438801 CCDC168Q8NDH2 2452 aa3.34□□□□□ -1.88
HMGB1P18-201ENST00000438801 ANKRD30BQ9BXX2 1392 aa3.34□□□□□ -1.88
HMGB1P18-201ENST00000438801 LOC400499M0QZD8 3231 aa3.34□□□□□ -1.88
HMGB1P18-201ENST00000438801 CDC42BPAQ5VT25 1732 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZFHX3Q15911 3703 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 F8W8V4 182 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 TPP1O14773 563 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 SPTLC2O15270 562 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 CBFA2T3O75081 653 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 SCGB1D2O95969 90 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZBED1O96006 694 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ANXA2P07355 339 aaKnown RBP3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 RPL17P18621 184 aaKnown RBP3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 DRD1P21728 446 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 MATN1P21941 496 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 TNFRSF8P28908 595 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 CHRNA5P30532 468 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ATICP31939 592 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZNF84P51523 738 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 HYAL1Q12794 435 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 BFSP2Q13515 415 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 DLGAP5Q15398 846 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ASIC2Q16515 512 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 SMTNL2Q2TAL5 461 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ODF3L2Q3SX64 289 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ODR4Q5SWX8 454 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 NXNQ6DKJ4 435 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 PDXDC1Q6P996 788 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 CHST15Q7LFX5 561 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 TCEAL8Q8IYN2 117 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 KIAA2013Q8IYS2 634 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 FBXL14Q8N1E6 418 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ARL14EPQ8N8R7 260 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ABHD5Q8WTS1 349 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 STRBPQ96SI9 672 aaKnown RBP3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 MEIS3Q99687 375 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 NTPCRQ9BSD7 190 aaKnown RBP3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 PIMREGQ9BSJ6 248 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ARHGAP39Q9C0H5 1083 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 MYLK2Q9H1R3 596 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 ZBTB26Q9HCK0 441 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 SELENONQ9NZV5 590 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 IPO11Q9UI26 975 aaKnown RBP3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 DMDP11532 3685 aa3.33□□□□□ -1.88
HMGB1P18-201ENST00000438801 KIR2DS5A0A0G2JLQ3 304 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 KIR2DS3K7RE56 304 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 CCNT2O60583 730 aaKnown RBP3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 ENO1P06733 434 aaKnown RBP3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 ARP10275 920 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 MT3P25713 68 aa3.32□□□□□ -1.88
HMGB1P18-201ENST00000438801 GPS1Q13098 491 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms