RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 MIDNQ504T8 468 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 ATPAF1Q5TC12 328 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 ANKRD40Q6AI12 368 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 RHPN2Q8IUC4 686 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 NRSN1Q8IZ57 195 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 OR4N4Q8N0Y3 316 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 SLC44A5Q8NCS7 719 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 MYRIPQ8NFW9 859 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 SLC22A17Q8WUG5 538 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 TRAPPC12Q8WVT3 735 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 RTKNQ9BST9 563 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 FAM167BQ9BTA0 163 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 SEPSECSQ9HD40 501 aaKnown RBP3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 ITM2CQ9NQX7 267 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 PCDHA12Q9UN75 941 aa3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 UBE2J1Q9Y385 318 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P12-201ENST00000438745 TET3O43151 1660 aa3.71□□□□□ -1.81
HMGB3P12-201ENST00000438745 EFCAB6Q5THR3 1501 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 PREX2Q70Z35 1606 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 CDC42BPBQ9Y5S2 1711 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 KIR2DS5A0A0G2JLQ3 304 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 IGLV5-39A0A0G2JS06 123 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 F8W810 466 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 KIR2DS3K7RE56 304 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 M0QYT0 321 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 WNT1P04628 370 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 SNHG28P0DPA3 235 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 AKR1A1P14550 325 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC8A1P32418 973 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 PRKAA2P54646 552 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 GALNT15Q8N3T1 639 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 STT3BQ8TCJ2 826 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 CSGALNACT1Q8TDX6 532 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 WDR60Q8WVS4 1066 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 HMGB4Q8WW32 186 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 ZFPM2Q8WW38 1151 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 RILPL2Q969X0 211 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 C3orf49Q96BT1 292 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 GPR78Q96P69 363 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 MECRQ9BV79 373 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 TMEM120AQ9BXJ8 343 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 PABPC3Q9H361 631 aaKnown RBP3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 TP63Q9H3D4 680 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 TAF1DQ9H5J8 278 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 CCDC134Q9H6E4 229 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 ELAC1Q9H777 363 aaKnown RBP3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 FBXO28Q9NVF7 368 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 MSRB1Q9NZV6 116 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 LUZP4Q9P127 313 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 CFDP1Q9UEE9 299 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 MAP3K5Q99683 1374 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 PLEKHH2Q8IVE3 1493 aa3.71□□□□□ -1.82
HMGB3P12-201ENST00000438745 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 TNS1Q9HBL0 1735 aaKnown RBP3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 NKX2-8O15522 239 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 KRT38O76015 456 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC3A2P08195 630 aaKnown RBP3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 CCKARP32238 428 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 PNLIPRP1P54315 467 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 BIRC3Q13489 604 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 PGM5Q15124 567 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 AAK1Q2M2I8 961 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 PIK3CD-AS1Q5SR53 167 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 MANEAQ5SRI9 462 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 SYNE3Q6ZMZ3 975 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 ZNF793Q6ZN11 406 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 COLCA1Q6ZS62 124 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 ZNF354CQ86Y25 554 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 SLC44A2Q8IWA5 706 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 CPXCR1Q8N123 301 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 PELI3Q8N2H9 469 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 FAM47BQ8NA70 645 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 OR52N4Q8NGI2 321 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 OTUD7AQ8TE49 926 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 KAT2BQ92831 832 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 EID2BQ96D98 161 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 REXO5Q96IC2 774 aaKnown RBP3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 MARK4Q96L34 752 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 TRAPPC9Q96Q05 1148 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 ZNF347Q96SE7 839 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 IL21RQ9HBE5 538 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 SRP68Q9UHB9 627 aaKnown RBP3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 RAB21Q9UL25 225 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 DAPP1Q9UN19 280 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 DHX57Q6P158 1386 aaKnown RBP3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 UTRNP46939 3433 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 NUP188Q5SRE5 1749 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 WDR90Q96KV7 1748 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 ABCC5O15440 1437 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 ADGRL3Q9HAR2 1447 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 NPHP3Q7Z494 1330 aa3.7□□□□□ -1.82
HMGB3P12-201ENST00000438745 C1orf167Q5SNV9 1468 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 FYCO1Q9BQS8 1478 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 PLEKHG1Q9ULL1 1385 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CYP3A7-CYP3A51PA0A087WV96 503 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 A0A1W2PPC1 479 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 B4DGG1 531 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 IKBKBO14920 756 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 NPHP1O15259 732 aa3.69□□□□□ -1.82
HMGB3P12-201ENST00000438745 CREB3O43889 395 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms